KEGG   Variovorax paradoxus EPS: Varpa_0001
Entry
Varpa_0001        CDS       T01392                                 
Name
(GenBank) chromosomal replication initiator protein DnaA
  KO
K02313  chromosomal replication initiator protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_0001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpe03032]
    Varpa_0001
   03036 Chromosome and associated proteins [BR:vpe03036]
    Varpa_0001
DNA replication proteins [BR:vpe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Varpa_0001
Chromosome and associated proteins [BR:vpe03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Varpa_0001
SSDB
Motif
Pfam: Bac_DnaA Bac_DnaA_C DnaA_N AAA IstB_IS21 AAA_14 ATPase_2 AFG1_ATPase AAA_22 AAA_16 RNA_helicase HP0268 AAA_24
Other DBs
NCBI-ProteinID: ADU34224
UniProt: E6UWL9
Position
88..1467
AA seq 459 aa
MSTDGIGESLWQACVDQLAQELSEQQFNTWIKPLTAQVADDLSRMTVFVANRFKLDWIRA
QYAGKIAAMAEKMYGQPVAVELALAPREAPVRSAPIAVMTETDVPRDVAGPGEEPAAAGF
KNRLNSGLTFDTLVEGTANRMARAAAMHVAGMPGHLYNPLFIYGGVGLGKTHLMHAVGNR
LLADRPDSKVLYIHAEQFVSDVVKAYQRKTFDEFKERYHSLDLLLIDDVQFFANKDRTQE
EFFNAFEALLAKKSHIVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILIN
KARAESAEMPEEVAFFVAKNVRSNVRELEGALRKILAYSRFNQKEISIALAREALRDLLS
IQNRQISVENIQKTVADYYKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGEL
FGGRDHTTVLHAVRKISGERQQLTELNQQLHVLEQTLKG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtcgactgacggcatcggcgaaagcctctggcaggcctgcgtcgaccagctcgcgcag
gagctgtccgagcagcagttcaacacctggatcaagcccctgaccgcacaggttgccgac
gacctgtcgcgcatgacggtgttcgtggcaaaccgcttcaagctcgactggatccgcgcc
cagtacgccggcaagatcgccgccatggccgagaagatgtacggccagccggtggccgtc
gagttagcgcttgctcctcgcgaagcacccgtccgctctgcgcccatcgccgtgatgacc
gagaccgatgtgccgcgtgacgtggccggtccgggcgaagagcctgccgctgccggcttc
aagaaccgcctgaattcaggcctcactttcgacacccttgtcgaaggcacggccaaccgc
atggcgcgcgccgccgcgatgcacgtggccggcatgccgggtcacctgtacaacccgctt
ttcatctacggcggcgtcggcctgggcaagacccacttgatgcacgctgtgggcaaccgg
ctgctggccgatcgccccgattccaaagttctctacatccacgccgagcaattcgtctcg
gatgtggtcaaggcctatcagcgcaagactttcgatgagttcaaggagcggtatcactcg
ctcgacctgttgctgatcgacgatgtgcagttcttcgccaacaaggaccgcacgcaggaa
gaattcttcaacgcgttcgaggccctgctcgccaagaagtcgcacatcgtgatgaccagc
gacacctaccccaagggcctggccgacatccacgagcgactggtttcacgcttcgattcc
ggcctcacggtggccatcgagccgcccgagctcgagatgcgcgtggccattcttatcaac
aaggcgcgcgccgaatcggccgagatgccggaagaggtcgctttcttcgttgccaagaac
gtgcgctccaacgtgcgcgagctcgaaggggcgctgcgcaagatcctggcttactcgcgc
ttcaaccagaaggagatctcgatcgccctggcacgcgaggcgctgcgcgacctgctgtcg
atccagaaccggcagatctcggtcgagaatatccagaagacggtggccgactactacaag
atcaaggtcgccgacatgtacagcaagaaacgcccggccagcattgcgcggccgcggcag
atcgcgatgtacctggccaaggagctcacgcaaaaaagcctgccggaaatcggcgagctg
ttcggcgggcgcgaccacacgacggtgctgcacgcggtgcgcaagatctcgggcgagcgc
cagcagctcaccgagctcaaccagcagctgcacgtcctcgaacagacgctcaagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system