KEGG   Variovorax paradoxus EPS: Varpa_1297
Entry
Varpa_1297        CDS       T01392                                 
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
  KO
K02033  peptide/nickel transport system permease protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_1297
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_1297
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Varpa_1297
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N
Other DBs
NCBI-ProteinID: ADU35513
UniProt: E6UZ96
Position
1451647..1452609
AA seq 320 aa
MMKMKSASLRYIASRAGGMLIVLAIVAVLVFVLTRAASGDPVSVLLGDQATAADIARVQK
DYGLDKPLPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERAEPTTLLALMAVAIAALIG
VPCGIVSAVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAP
FMERLHALVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESKVVLKHALR
NALVPIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIY
VLINFSIDLLYAVVDPRVKV
NT seq 963 nt   +upstreamnt  +downstreamnt
atgatgaagatgaagagcgcttcgctccgctacatcgcctcccgcgcaggcggcatgctc
atcgtgctcgccatcgtggcggtgctggtcttcgtgctcacgcgcgccgcatcgggcgac
ccggtctcggtgctgctgggcgaccaggccacggccgccgacatcgcgcgcgtgcagaag
gactacggcctcgacaaaccgctgcccgtgcagttcggctactggctgcgcgaagtgctg
cagggcaacctgggcacctcgatctttctgcagcgcccggtgacacaggcgctttgggag
cgcgccgagcccaccacgctgctcgcgctcatggccgtggccatcgcggcgctgatcggc
gttccttgtggcatcgtctcggcggtgttccgagggcgggtggtcgaccagctcttcacc
ggcatcgcgatgctcggggcgagcattccgagcttctggctgggcatcgtgctgatccag
atcttcgcggtgtcgttcggctggttcccggtgtcgggctacggcgcgcccgatgcgcca
ttcatggagcggctgcatgcgctggtactgcccgcgacggtgctgggcctgttgaactcg
gcgctcatcatccgcttcacgcgggcctcgatgctcgatgtgctcggtgaagactatgtg
cgcaccgcgcgctccaagggcctctccgaaagcaaggtggtgctcaagcacgcgctgcgc
aatgcgctggtgcccatcgtcacggtgatcggcctgacggtcgcgctgatgatcggcggc
gccgtcatcaccgagacggtgttcggcctgcccggcgtcggcaacctcgtggtgagcgcg
gtgctgcggcgcgactaccccgtgatccagggggcgctgctcgtgatcgccgcgatctac
gtgctcatcaatttctcgatcgacctgctctacgccgtcgtcgatcctcgcgtgaaggtc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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