KEGG   Variovorax paradoxus EPS: Varpa_1300
Entry
Varpa_1300        CDS       T01392                                 
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
  KO
K02032  peptide/nickel transport system ATP-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_1300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_1300
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Varpa_1300
SSDB
Motif
Pfam: ABC_tran oligo_HPY SMC_N AAA_16 AAA_29 AAA_22 ATP-synt_ab AAA_30 DUF5906
Other DBs
NCBI-ProteinID: ADU35516
UniProt: E6UZ99
Position
1454656..1455642
AA seq 328 aa
MTAVSSSSPLIEVRGLKKYFGSSDRPVRAVDDVSFAIQPGETLGLVGESGSGKSTIGRTV
LRLVERTEGQVLYRGDDIGALSGERMRKLRSKLQIIFQDPYASLNPKMRISAILGEALST
HGLHKGAAARDKRIAELLETVGLRAEHASRFPHEFSGGQRQRIGVARALAVEPEFIVADE
PLSALDVSIQSQVINLLADLRERLGLTMLFISHDLDVVEYLCDRVVVLYLGKVMEVAETD
ELFARPSHPYTQALLAASPKPDPTLATERIALKGDIPSPISPPSGCVFRTRCPHAIEACA
QTVPPLEEISPGHYSACIRKELLSNIAA
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaccgccgtttcttcttcctctcccctcatcgaagtccgcggcctgaagaaatacttc
ggcagcagcgaccgccccgtgcgcgcggtcgacgacgtgtcgttcgccatccagcccggc
gagacgctggggctggttggagaatcaggctcgggcaagagcaccatcggccgcaccgtg
ctgcgcctggtcgagcgcaccgagggccaggtgctctaccgcggcgacgacatcggcgcg
ctctcgggcgagcgcatgcggaagctccgcagcaagctgcagatcatttttcaggacccg
tacgcgagcctgaatccgaagatgcgcatcagcgcgatccttggcgaggcgctgtcgacg
cacgggctgcacaaaggggcagcggcgcgcgacaagcgcatcgccgaactgctggagacc
gtcggcttgcgcgccgagcatgcgagccggtttccgcacgagttctcgggcgggcagcgc
cagcgcatcggcgtggcgcgcgcgctcgcggtcgagccggagttcatcgtggccgacgag
ccgctgtccgcactcgacgtatcgatccagtcgcaggtcatcaacctgctggcggacctg
cgcgagcgcctgggtttgaccatgctcttcatctcgcacgatctcgatgtggtcgagtac
ctgtgcgaccgcgtggtggtgttgtacctgggcaaggtgatggaagtggccgagaccgac
gagctcttcgcgcggccttcgcacccctacacccaggcgcttctggccgcgagcccgaag
cccgatccgacgctcgcgaccgaacgcatcgcgctcaagggcgacatccccagccccatc
tctcccccttcgggctgcgtgttccgcacgcgctgcccgcacgccatcgaggcctgcgcg
cagaccgtgccgccgctcgaagaaatttctcccggacactacagcgcctgcatccgcaag
gaactgctctccaacatcgccgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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