KEGG T01392: Varpa

Variovorax paradoxus EPS: Varpa_1937

Entry

Varpa_1937        CDS       T01392

Name

(GenBank) DNA primase

K02316

DNA primase [EC:2.7.7.101]

Organism

vpe Variovorax paradoxus EPS

Pathway

vpe03030

DNA replication

Brite

KEGG Orthology (KO) [BR:vpe00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Varpa_1937
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpe03032]
    Varpa_1937
Enzymes [BR:vpe01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.101  DNA primase DnaG
     Varpa_1937
DNA replication proteins [BR:vpe03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Varpa_1937

SSDB

Motif

Pfam:

zf-CHC2 DNAG_N Toprim_2 Toprim_4 DnaB_bind Toprim Toprim_3

Other DBs

NCBI-ProteinID:

ADU36147

UniProt:

E6V8S5

Position

complement(2135124..2137115)

AA seq 663 aa
MTIPASFIQELIARADVVEIVGRYVPLKKAGANFMGLCPFHGEKSPSFSVSPTKQFYHCF
GCGVHGNAIGFLMEHAGMGFVEAVHDLAGQYGLQVPEDDASPAERARAASQRQKQATLTD
VLEKAGDAYRKSLRQAPGAIEYLKGRGVSGEVAKQFGIGYAPAGWRALASVFPDYDDPLL
AESGLVIVNTEDGQLEASEAKRYDRFRDRVMFPIRNVKGECIGFGGRVLGDEKPKYLNSP
ETPVFSKGRELYGLYEARAAFRDRGYALVTEGYMDVVALAQLGFPNAVATLGTACTTEHV
QKLFRFTESVVFSFDGDAAGRRAARKALDGALPYATDVRSIKFLFLPAEHDPDSFIREHG
AEAFARFVAEATPLSRFMLEAAREGCDLTTAEGRAHMTSNVRPLWSAMPDGALKRQLLSE
IATLVQLDAAALSDLWASTPGPRKVAAPPSPRYSESSGDGGDYPDMPPPMEFEAPRYETD
SKPRKFVKGKRWGGKFEEPIEPLRGRGKPPSRPDVAVRLLLSNMAQWDALSHELHLMLCD
LPGTHGALFTWLDSQLHEHGVQPWAALREGMRGLDFEALAERLMNVADAVPVPEGEEEQH
LADAAKELSSVLDFMLDDRLKAQQSEAIAAVGKDPKALERYKALEARRLELRNRLSPRGS
ETA

NT seq 1992 nt +upstreamnt +downstreamnt
atgaccatccccgcttcattcatccaggaactcatcgcgcgcgccgatgtggtcgagatc
gtcggccgctatgtgccgctcaagaaggccggcgccaacttcatggggctgtgccccttt
cacggtgagaaatccccctctttttccgtcagcccgaccaagcagttctatcactgcttc
ggctgcggggtgcatggcaacgccatcggctttctcatggagcacgcgggcatgggcttc
gtcgaggcggtgcacgatctcgccggccagtacggcctgcaggtgcccgaggacgacgcc
tcccctgccgagcgcgcccgcgccgcgagccagcgccagaagcaggccacgctgaccgac
gtgctcgaaaaggctggcgacgcgtaccgcaagtcgctgcggcaggcgcccggcgccatc
gaatacctcaagggccgcggcgtctccggcgaagtggccaagcagttcggcatcggctat
gcgcccgcgggctggcgcgcgctggccagcgtgttccccgactacgacgatccgctgctc
gccgagagcggcctcgttatcgtcaacaccgaagatggccagctcgaggccagcgaggcc
aagcgctacgaccgcttccgcgaccgggtgatgttcccgatccgcaacgtcaagggcgaa
tgcatcggtttcggcgggcgggtgctcggcgacgaaaagcccaagtacctgaactcgccc
gaaacgcccgtgttcagcaagggccgcgagctctacggcttgtacgaagcgcgcgccgcc
ttccgcgaccgcggctatgcgctggtcaccgagggctacatggacgtggtcgccctcgcg
cagctgggctttccgaacgcggtggccacgctcggcaccgcctgcacgaccgagcatgtg
cagaagctcttccgcttcaccgaatcggtggtcttcagcttcgacggcgacgccgcaggc
cgccgcgccgcgcgcaaggcactcgacggcgccctgccctatgccaccgatgtgcgcagc
atcaagttcttgttcctgcctgccgagcacgatcccgacagcttcatccgcgaacacggc
gccgaggccttcgcccgcttcgtcgccgaggccacgccgctgtcgcgcttcatgctcgaa
gccgcccgcgaaggctgcgacttgaccaccgccgaaggccgggcccacatgaccagcaac
gtgcgcccgctctggagtgcgatgccggatggcgcgctcaagcggcagttgctgagcgag
atcgccacgctggtgcaactcgatgcggcagcgctttcggacctttgggcctccacgccc
ggcccgcgcaaggtcgcggccccgccttcacctcgctacagcgaatccagcggcgatggc
ggggactatccggacatgccgccgccgatggaatttgaggcgccgcgctatgaaaccgat
agcaagccgcgcaagttcgtcaagggcaagcgctggggtggcaagttcgaagagcctatc
gagccattgcgcggtcgcggcaagccgccgagccggcccgacgtggcggtgcggctgctg
ctctcgaacatggcgcagtgggatgcgctctcgcacgaactccatctgatgctgtgcgac
ctgcccggcacgcacggcgcgctcttcacctggctcgacagccagttgcacgagcacggt
gtgcaaccctgggcggcgctgcgcgaaggcatgcgagggctggatttcgaagcgctggcc
gaacggctcatgaacgtcgccgatgcagtgccggtgcctgagggcgaggaggagcagcat
ctcgccgacgcggcgaaggagctttccagcgtgctcgacttcatgctggacgatcggctc
aaggcccagcaaagcgaagccatcgccgccgtcggaaaagacccgaaagcgctggagcgc
tacaaggcgctcgaggcgcggcggttggaattgcgcaaccgcctgagtccacgcggttca
gaaactgcttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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