KEGG   Variovorax paradoxus EPS: Varpa_2503
Entry
Varpa_2503        CDS       T01392                                 
Name
(GenBank) UvrD/REP helicase
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpe03400]
    Varpa_2503
Enzymes [BR:vpe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Varpa_2503
DNA repair and recombination proteins [BR:vpe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Varpa_2503
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: ADU36703
UniProt: E6V0K2
Position
2715281..2718541
AA seq 1086 aa
MNGAAYEHNGRHVTREAFYTVACDPRRSVAVEACAGAGKTWMLVSRILRALLEEGDSACE
PHEILAITFTKKAAGEMRERLDQWLEQFAEESPEELVKQLVMRGVEPAAALAAVPRLKGL
YRRLLEGGRPVQFRTFHAWFAGLLRNAPLAVLRELGLPSNYELLEDDAEARGHTWRPFFE
AVTADKLALADYYAVVATHGRSQTAKALGEALTKRVEFSLADAENAVQHFSAMYPALEGL
DEPTQALRGDSVRRRWLDRAAALGRETNKTPQKAAEAIIDVFGVGEPAVESLSAALAHLR
KNFFVASEDRLTKNLQKFPAAQEAEAELQVLCAAQAQHAAWLYQQRMTRLTRLLIAAFAD
VKRAHGWVDMNDVEQAAQLLLGQSALSGWVQERLDARIAHLLIDEFQDTNPLQWQALYGW
LSSYTGAGSSAPRVFIVGDPKQSIYRFRRAEPQVFIAAKKFVREGLDGELLNCDHTHRNA
RAVVGLVNQAMLAAQDAGEFDGYRAHTTERGDEGELLKLPAIDRDALGDAAEAAPADDGM
LHWRDSLVTPRVLPEEQLLQKECEQAARWVAQRIADGIPPRQIMVLARRRNRLSAMQDAL
RQRHIPVQQPEKNELHDAPEVQDMVALIDALVSPTHDLSLARALKSPLFNIDDEVLVQLA
LRQRAHSSSSWFALIQKGEGLPPVLVETGVSLKKWQRWLVTLPPHDAIDAIFHDGDVLAK
FGAAVPAAMRQSALANLRGLMSASLEIEGARFATPYALVRALRAGGVRAPSVAAPDAVQL
LTVHGAKGLEADTVLMLDCDAAPPRAQTMGVLVEWKGSDSAPTRFVFLASEKTPPACAAS
LLEEEQRARHREELNGLYVATTRARERLVLSSVKPARANEGSWWARLESACEPTEADEPL
VELPVETGVRSFSMKQMPPAAAAVDQPSAKKAADATVDARAAAFGQAMHRLLEWAVPGET
LPSAHVRAAAREFMLDPQQARGAATLAERIRAGAGAWVWDDRRVDWHGNEVTLVHEGETL
RIDRLVRERETGAWWILDYKSAARPERDATLIAQMQRYRAAVQHAYPGATVRVAFLTGQG
ELVNLE
NT seq 3261 nt   +upstreamnt  +downstreamnt
gtgaacggcgcagcctacgaacacaacggccggcacgtcacgcgcgaggccttctacacc
gtcgcctgcgatccgcgccgctcggtggccgttgaagcctgcgcgggcgcgggcaagacg
tggatgctcgtgtcgcgcatcctgcgcgcgctcctcgaggagggcgactccgcctgcgag
ccgcatgaaatcctcgcgatcactttcaccaagaaggcggccggcgagatgcgcgagcgt
ctcgaccaatggcttgagcagttcgcagaagaaagccccgaagaactcgtgaagcagctc
gtgatgcgcggcgtcgaacctgctgccgcattggctgccgtgccgcgactgaagggtctc
tacaggcgcctgctcgaaggcggacgcccggtgcagttccgcacttttcacgcctggttc
gcaggcctgctgcgcaacgcgccgctcgcagtgctacgcgaactgggcctgccttccaac
tacgaactgctcgaagacgatgccgaggcccgcggccacacctggcggccgttcttcgaa
gcggtcacggccgacaagcttgcactcgccgactactacgctgtcgtcgcgacgcacggc
cgctcgcagacggcaaaggcgctgggcgaagcgttgaccaagcgcgtcgagttctcgctg
gccgatgctgaaaacgccgtccagcacttcagcgccatgtacccggcgctcgaagggctg
gacgagccgacccaggccctgcgcggcgactcggtccgccgccgttggctcgaccgcgcc
gccgcactcggccgcgagaccaacaagacgccgcagaaggcggccgaggccatcatcgac
gtgttcggcgtcggcgagcccgcagtcgaatcgctctccgcagcgctcgcgcacctgaga
aagaacttcttcgtcgccagcgaagaccggctcaccaagaatctgcagaaattccccgcc
gcgcaagaggcagaagccgagctccaggtgctgtgcgccgcgcaggcccagcacgcggca
tggctctaccagcagcgcatgacacggctcacgcgccttctcatcgccgctttcgcggac
gtcaagcgcgcccacggctgggtcgacatgaacgacgtcgagcaagccgcgcagttgctg
ctcggccagtcggcgctgtcgggctgggtgcaggaacggctcgacgcacgcatcgcgcac
ctcttgatcgacgagttccaggacaccaatccgctgcagtggcaggcactctacggctgg
ctcagttcctacacgggcgcgggcagcagcgcgccgcgcgtgttcatcgtgggcgacccg
aagcagagcatctaccgcttccgccgcgccgaaccgcaagtgttcattgccgccaagaag
ttcgtgcgcgaagggctcgatggcgaactgctcaactgcgaccacacgcaccgcaacgca
cgcgcagtggtcgggctcgtcaaccaggccatgctggccgcacaggatgcgggcgagttc
gatggctatcgcgcccacaccaccgagcgtggcgacgagggcgagcttctcaagctgccg
gccatcgaccgcgacgcgctcggcgacgcggcggaagccgcacccgcagatgacggcatg
ctccactggcgcgatagcctcgtcacgccgcgcgtgctgcctgaagaacaactgctgcag
aaggaatgcgagcaggccgcacgttgggtagcgcagcgcatcgccgacggcataccgccg
cggcagatcatggtgctggcgcgccggcgcaatcgtctgtccgcgatgcaggatgcgctg
cgccagcgccacattcccgtgcagcagcccgagaagaacgagctgcacgatgcgcccgag
gtgcaggacatggtcgcgctgatcgatgcgctcgtatcgcccacccacgatctctcgctg
gcgcgggcgttgaagtcgccgctcttcaacatcgacgacgaggtgctggtgcaactggcg
ttgcggcagcgcgcgcattcgtcgtcgagctggttcgcgttgatccagaaaggcgagggt
ttgccgccggtgttggtcgagacgggtgtcagcctgaagaaatggcagcgctggctcgtg
accctgccgccccacgatgccatcgacgccatctttcacgacggcgacgtgctcgcgaag
ttcggcgccgccgtgcccgccgcgatgcgccagagcgcgctggccaacctgcgcgggctg
atgtccgcatcgctcgagatcgaaggcgcgcgcttcgccacgccctatgcactggtgcgc
gcgctgcgtgccggcggcgtgcgcgcgccgtccgtcgccgcgcccgatgcggtgcagttg
ctgaccgtgcacggcgccaagggcctggaagccgacaccgtgctgatgctcgactgcgac
gccgccccgccgcgcgcgcaaaccatgggcgtgctggtcgaatggaagggcagcgacagc
gcgccgacgcgcttcgtcttcctcgcgagcgagaagacgccgccggcctgcgccgcttcg
ctgctcgaagaagaacagcgcgcgcgtcatcgcgaagagctcaacggcctctacgtcgcg
accacgcgggcgcgtgagcggctggtgctgtcgtcggtgaagccggcgcgtgccaacgag
ggcagctggtgggcccgcctcgaatcggcctgcgagccgaccgaggccgatgagccgctg
gttgagctgccagtcgagaccggcgtgcgcagcttctcgatgaagcagatgcctccagcg
gctgccgccgtcgatcagccttccgccaagaaggcggccgacgccacggtcgacgcgcgc
gccgccgccttcggccaggccatgcaccggctgctcgaatgggcggtgccgggcgagacg
ctgccctcggcccacgtgcgcgccgcggcccgcgaattcatgctcgatccgcaacaggcg
cgcggcgccgcgacactggccgaacgcatccgcgcgggggcgggtgcctgggtgtgggac
gatcgcagggtcgattggcatggcaacgaagtcacgctggtccacgaaggcgagaccctg
cgcatcgaccggctggtgcgagagcgcgagaccggtgcctggtggatcctcgactacaaa
tccgcagcgcgccccgaacgggacgcgacgttgatcgcacagatgcagcgctaccgcgcg
gcggtgcaacatgcctaccctggtgccacggtccgcgtcgcgttcctcaccgggcagggc
gaactggtaaatctcgaatga

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