KEGG   Variovorax paradoxus EPS: Varpa_2899
Entry
Varpa_2899        CDS       T01392                                 
Name
(GenBank) type VI secretion protein, VC_A0107 family
  KO
K11901  type VI secretion system protein ImpB
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_2899
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_2899
SSDB
Motif
Pfam: T6SS_VipA TcdA1_RBD_3
Other DBs
NCBI-ProteinID: ADU37090
UniProt: E6V5U9
Position
3119135..3119707
AA seq 190 aa
MADNRVRNSGQKFIARNRAPRVQIEYDVEIYGSERKIQLPFVMGVIADLAGKQMDPMPDL
AERDFMEVDIDNFDDRMKAIKPRVAFQVPNTLTGEGQMNVDITFDTMDDFSPARIAGQVG
ALQQLLAARTELSNLLSYMDGKNGAEQLIAQALQNPALLKSLASAPNPAVAKAVEAANEK
AGHAPGGSPE
NT seq 573 nt   +upstreamnt  +downstreamnt
atggcagacaaccgtgtcagaaacagtggtcagaagttcatcgcgcggaaccgggcgccg
cgtgtgcagatcgagtacgacgtcgagatctacggcagcgaacgcaagatccagctgccc
ttcgtgatgggcgtgatcgccgacctcgcgggcaagcagatggacccgatgcccgatctg
gccgagcgcgatttcatggaagtcgacatcgacaacttcgacgaccgcatgaaggcgatc
aagccgcgcgtggcgttccaggtgcccaacacgctcacgggcgaaggccagatgaatgtc
gacatcaccttcgacaccatggacgacttctcgcccgcgcgcatcgcgggccaggtgggc
gcgttgcagcagttgctcgccgcacgcaccgaactgtcgaacctgctctcgtacatggac
ggcaagaacggtgccgagcaattgatcgcgcaggccctgcagaacccggcgctgctcaag
tcgctcgcttccgcgcccaacccggctgtcgccaaggcggtcgaagcggcgaacgagaaa
gcgggccacgcgcccggcggttctcccgagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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