KEGG   Variovorax paradoxus EPS: Varpa_3310
Entry
Varpa_3310        CDS       T01392                                 
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00240  Pyrimidine metabolism
vpe00250  Alanine, aspartate and glutamate metabolism
vpe01100  Metabolic pathways
vpe01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Varpa_3310
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Varpa_3310
Enzymes [BR:vpe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     Varpa_3310
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS ATP-grasp ATPgrasp_Ter Dala_Dala_lig_C ATP-grasp_4 ATP-grasp_3 HTH_50 Pus10_C
Other DBs
NCBI-ProteinID: ADU37495
UniProt: E6VB46
Position
complement(3560458..3563706)
AA seq 1082 aa
MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGASTHKPV
ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHTMDEAWAVQKTLGFPTVIRPSFT
LGGTGGGIAYNPDEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKT
QDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELELET
KSLDDIDKDTLLALKKKGFSDRRLAKQLKTTDTAIREKRRALGVRPVYKRVDTCAAEFAT
NTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLEANGV
PIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEALEKAAALSYPLVVRPSYV
LGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCIRDAEGGTLIGGV
MEHIEQAGVHSGDSACSLPPYSLSAETIAELKRQSAAMAAALNVVGLMNVQFAIQQKDGK
DVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLASQGVTKEVTPPYFSVKEAV
FPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQIGAGTHLPKSGKVFISVKNNDK
ARAVEVARGLAKLGFELIATKGTAAAIATAGIECATVNKVTEGRPHIVDMIKNNEIALVI
NTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFMDELGVISVQEMHAQLA
AA
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgcctaagcgcacagacctcaaatcgatcctcatcatcggcgccggcccgatcatcatc
ggccaggcctgcgagttcgactactccggcgtgcaggcctgcaaggcgctgcgcgaagag
ggctacaaggtcatcctgatcaacagcaaccccgcgacgatcatgaccgacccggccacc
gccgacgtcacctacatcgagccgatcacctggcagacggttgagaagatcatcgccaag
gaacgccccgacgcgatcctgccgaccatgggcggccagaccgcgctgaactgcgcgctc
gacctgtggcgcaacggcgtgctcgacaagtacacgggcgcgtccacccacaagccggtc
gagctcatcggcgccacgcccgaagccatcgacaaggccgaagaccgcttgaagttcaag
gacgcgatgaccaagatcggtctcggttcggcccgctcgggcatcgcgcacacgatggac
gaagcctgggccgtgcagaagacgctgggctttccgaccgtgatccgccccagcttcacg
ctcggcggcacgggcggcggcatcgcctacaaccccgacgaattcgagaccatctgcaag
cgcggcatcgaagcctcgcccaccaacgagctgctgatcgaagaatcgctgctcggctgg
aaagagtacgagatggaggtcgtgcgcgacaaggccgacaactgcatcatcgtctgctcg
atcgagaacctcgacccgatgggcgtgcacaccggcgactcgatcaccgtggcccccgcg
cagacgctctccgacaaggaataccagatcctgcgcaacgcctcactggccgtgctgcgt
gagatcggcgtcgataccggcggctcgaacgtgcagttctccatcaatccgaaggacggc
cgcatggtcgtcatcgagatgaacccgcgggtctcgcgttcttcggcgctggcctccaag
gccacgggcttcccgatcgccaaggtcgcagccaagctggccgtgggctacacgctcgac
gaactgcgcaacgagatcaccggcggcgcgacgcccgcgtcgttcgaaccgtcgatcgat
tacgtggtcaccaagattccgcgcttcgcgttcgagaaatttccgcaggctgattcgcgt
ctcacgacgcagatgaagtcggtgggcgaggtgatggccatgggccgcaccttccaggaa
tcgttccagaaggccctgcgcggcctcgaagtgggcgtcgatggcctgaacgagaagacg
caggaccgcgaagtgctcgaaaaggaattgggcgagcccggtcccgagcgcatctggtac
gtgggcgatgccttcgccatgggcctgagcgtggatgaagtgttcgcgctgaccaagatc
gacccgtggttcctggtgcagatcgaggagatcgtgaagatcgaactcgagctggaaacc
aagtcgctggacgacatcgacaaggacacgctgctcgcgctcaagaagaagggcttctcc
gatcggcgcctggccaagcaactgaagaccactgacacggctatccgcgagaagcgccgg
gctctcggtgtacgcccggtctacaagcgcgtggacacctgcgcggccgagttcgcgacc
aacacggcctacatgtattcgacctatgaagacgagtgcgaagccgaccccacggacaag
aagaagatcatggtgctcggcggcggtcccaaccgcatcggccagggcatcgagttcgac
tactgctgcgtgcacgccgcgctcgcgatgcgcgaggacggctacgagaccatcatggtc
aactgcaatcccgagaccgtgtcgaccgactacgacacctccgaccgcctgtacttcgag
ccgctcacgctcgaagacgtgctggagatcgtcgacaaggaaaagccgctcggcgtgatc
gtgcagtacggcggccagacgccgttgaagctcgcgctggacctcgaagccaacggcgtg
ccgatcatcggcacctcgcccgacatgatcgacgcggccgaagaccgcgagcgctttcag
aagctgctgcacgagctgggcctgcgccagccgccgaacgccaccgcgcgcaccgaacct
gaagcgctcgaaaaggctgcggccctcagttatccgctggtggtgcgtccgagctatgtg
ctcggtggccgcgcgatggaaatcgtgcacgagcagcgcgacctcgagcgctacatgcgt
gaagcggtcaaggtgagcaacgactcgccggtgctgctcgaccgcttcctgaacgacgcc
gtcgagtgcgacgtcgactgcatccgcgacgccgaaggcggcacgctgatcggcggcgtg
atggagcacatcgaacaggccggcgtgcactcgggcgactccgcctgctcgctgccgccc
tacagcctgagcgccgaaacgatcgccgagctcaagcgccagagcgctgccatggcggcg
gcactgaacgtggtcggcctcatgaacgtgcagttcgcaatccagcagaaggatggcaag
gacgtcatctacgtgctcgaagtgaacccgcgtgcgtcgcgcaccgtgccttacgtgagc
aaggccaccggcatccagctcgccaaggtggccgcacgctgcatggccggccagtcgctc
gcatcgcagggcgtgaccaaggaagtgacgccgccgtacttcagcgtgaaggaagccgtg
ttcccgttcgtcaagttcccgggcgtggacaccatcctcggccccgagatgaagtcgacc
ggtgaagtgatgggcgtgggcaagaccttcggcgaagccttcgtgaagtcgcagatcggt
gccggcacgcacctgccgaagtcgggcaaggtcttcatctcggtgaagaacaacgacaag
gcgcgtgccgtggaagtggcgcgcggcttggcgaagctgggcttcgaattgatcgcgacc
aagggcacggccgccgccatcgccaccgcgggcatcgaatgcgcgacggtgaacaaggtg
accgaaggccgcccgcacatcgtggacatgatcaagaacaacgagattgcgctggtcatc
aacacggtggaagagcgccgcaacgcgatcaccgattcgcggcagatccgcacctcggcg
ctgctggctcgcgtgaccaccttcaccacgatcttcggcgccgaagccgcggtcgagggc
atgggcttcatggacgagctgggcgtgatctcggtgcaggagatgcacgcgcaactggct
gcggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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