KEGG   Variovorax paradoxus EPS: Varpa_3505
Entry
Varpa_3505        CDS       T01392                                 
Name
(GenBank) cysteinyl-tRNA synthetase
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Varpa_3505
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vpe01007]
    Varpa_3505
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpe03016]
    Varpa_3505
Enzymes [BR:vpe01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     Varpa_3505
Amino acid related enzymes [BR:vpe01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Varpa_3505
Transfer RNA biogenesis [BR:vpe03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Varpa_3505
 Prokaryotic type
    Varpa_3505
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g DALR_2 tRNA-synt_1 tRNA-synt_1f
Other DBs
NCBI-ProteinID: ADU37689
UniProt: E6UX53
Position
complement(3781630..3783006)
AA seq 458 aa
MSLRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGF
DVTYVRNITDIDDKIIRRAVENGESIRALTDRMIDALHEDADALGIARPTHEPRATDYIP
QMLSMIGTLEKKGLAYRAENGDVNYAIRKFPGYGKLSGKSIDELHAGERVAVLDGKDDPL
DPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGEDLQFPHHE
NEIAQSEGANDKPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVLKKYDAETIRFFVLRA
HYRRPLNYSDVHLDDARNSLKRLYTALDLVAPAEVTIDWTDPYAARFKAAMDEDFATPEA
VAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSDPKSFLRAGATLDDAAIQAQIDARA
AAKAAKNFAEADRIRQGLLEQGIVLKDSPTGTSWTVAK
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagtctgcgcatctacaacacgctgtcgcgtgaattggaggaattctccccattgcaa
cctggcaaggtgcgcatgtacgtttgcggcatgacggtctacgactattgccacctgggc
catgcccgctcgatgatcgccttcgacgtggtgcagcgctggctcaaggccagcggcttc
gacgtgacctacgtgcgcaacatcaccgacatcgacgacaagatcattcgccgcgccgtg
gaaaacggcgagagcatccgcgcgttgaccgatcgcatgatcgacgcgctgcacgaagac
gccgatgcgctgggcatcgcgcgccccacgcacgagccacgcgccaccgactacatcccg
cagatgctgtcgatgatcggcacgctcgagaagaagggcctggcttatcgcgccgagaac
ggcgacgttaactacgccatccgcaagttccccggctacggcaagctgagcggcaagtcg
atcgacgagctgcatgcgggcgagcgcgtggccgtgctcgacggcaaggacgacccactc
gaccccgtgctctggaagagcgcgaaggcgagcgagcccgaagaggtgaagtgggccagc
gagttcggcgctggccgtccgggctggcacatcgagtgctcggccatggcctgcgcgctg
ctgggcgaaacactcgacatccacggcggcggcgaagacctgcagttcccgcaccacgaa
aatgaaatcgcgcagagcgaaggcgccaacgacaagccgctgtccaactactggatgcac
aacggcttcatcgtgaccgacaacgagaagatgtccaagagcctgggcaacttcttcctg
atccgcgacgtgctgaagaagtacgacgccgagaccatccgcttcttcgtgctgcgcgcg
cactaccgtcggccgctcaactacagcgacgtgcatctggacgacgcgcgcaattcgctc
aagcgcctgtatacggcgctggacctggtcgcgccggccgaggtgacgatcgactggacc
gatccatatgccgcgcgcttcaaggccgcgatggacgaagatttcgcaacgcccgaagcg
gtggccgtgctgttcgacctggcgggtgaagtcaaccgcacgcgctcggccacgcaggcc
gggctgctgaaggcgctgggtgggtgcgtgcagatattgcaaagcgacccgaagagtttc
ctccgcgcaggcgcaacgctcgacgatgcggccatccaggcgcagatcgatgcgcgtgcc
gccgccaaggccgcgaagaatttcgccgaagccgatcgcatccgccagggattgcttgag
cagggcatcgtgctcaaggattcgcccactggcacgagctggaccgtcgcgaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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