KEGG   Variovorax paradoxus EPS: Varpa_4326
Entry
Varpa_4326        CDS       T01392                                 
Name
(GenBank) Beta-ketoacyl synthase
Organism
vpe  Variovorax paradoxus EPS
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 KR Ketoacyl-synt_C KAsynt_C_assoc PP-binding adh_short adh_short_C2 Beta-ketacyl_N Thiolase_N Epimerase
Other DBs
NCBI-ProteinID: ADU38495
UniProt: E6V980
Position
complement(4683485..4688113)
AA seq 1542 aa
MTTAFNESVEPTGLEIAIVGLSGRFPGADDVDAFWRNIEGGVESVSRFTDEQLRERGVPQ
SLLDDPDYVKAGVMFEGFDQFDAGFFGYTPREAENLDPQQRVFLECASAALEHAGCDPER
WPGKVGVYAGEGANVYLIRNLLPSFGLGAHTGIADLLGLMSGNSGGSLCTRVAYKLNLRG
PAVSVQTACSTSLTAVHTACQALLSHDCDMALAGGVWLNLLQEGGYRYQAGAILSPDGHC
RAFDADAAGTVIGSGAGVVSLKRLDEALRDGDTIHAVIKGTAANNDGSAKVGFTAPSIDG
QAEVIRAAQLIAGVSADTIGYIETHGTGTTLGDPIEIAALTQAFRADTERRGFCAVGSVK
TNIGHLDAAAGVAGLIKATMALKHGVLPPSLHFTKPNPQIDFASSPFYVNAQRQPWPEGR
TPRRAGVSSFGIGGTNVHVVLEEAPVARPSAQAKAPAWQILPLSARNTDALQQAAQRLAS
HLEEAGSGTSLADVAQTLQTGRRALAVRGAVVADGSATAVEALRAPESDFDQASGIPASA
PEVAFLFPGGGTQHANMGLALYRDHPAFRQEIDRCCDALRDAMGMDLRQLLYPAVGGEAA
ADEKLGRIEYTQPLLFIVEYAMARLWMSRGVQPAVMLGHSLGEYVAACLAGVFSLEDALR
IVATRGRLMQSMAPGAMTAIALSESELAPFLATGCDIAAINGEQLCVLAGPMAAIEAAEQ
QLFARGLMPRRLLVSIASHSAMTESIVAELQQVVASVPRSAPRIPFISNVTGKPITAQQA
VDPAYWGQHLRGTVRFADGMAELLRVQGRVLLEVGPGETLAGLARQHPLADSAAAILSSQ
AHPQKQAQNERQMASVIGQLWCAGVDIDWAACHPGRQARRVPLPTYPFQRRSYWTDMPEA
GSEAATSPVQKPGDPFHVPVWQRTEPAGMPTALTPADGCTLVFAETSGLTDALIRQLQAE
APAHPVFRVTPGSGYAETGAHQFTVRPGERADHEELLRKVQAESGPVAKVYHLWSVDGQP
SSSSSLPQSEDVLERGYFSLLALIQAIDSTSGGRARELSIEVIANQIEDASGLEPLCPEK
ATLFSLCKVIAQEYPHIACRVTDIVLPVPGSAAEAWLARQLAAPAQAPHDETLVAYRGPH
RWVKTYAPLPSGSAPQQRLRSKGVYLITGGLGGVGLAVARHLAESWQARLVLLGRTPLPE
RSEWEALVADEAQPQALRTRLAQLIELENLGGEVLVVAADVADAASMQAAVAEARARFGM
VQGVVHAAGHANSGMIATRTRAAIDEVFAPKLQGTRFLLDALRDEPLDFVLLCSSISSMA
GGLGMSDYAAANAYLDGLAALWQRSATYPVISVNWDAWRDLGMAAGRVLPDGIGMDGPEG
ARAVERIVNGPAFAQVVISTTDLNQRLGELDNGMLDLLETGPAAKKKRREHPRPALATPF
VAPEGELENVLAGIWQDMLGIASVGIDDNLFELGGDSLLAIQILARARKAYEVELHPAAF
FKAPTLRDLAILVETRLIEEIEAAAPLDAPADAEPDRSPAFV
NT seq 4629 nt   +upstreamnt  +downstreamnt
atgaccaccgccttcaacgaatccgtcgaacccaccggcctggaaattgccatcgtcggc
ctgtcggggcgcttccccggtgctgacgacgtggacgccttctggcgcaacatcgagggc
ggcgtggaatcggtatcgcgcttcaccgacgagcaactgcgcgaacgcggcgtgccgcaa
agcctgctggacgatcccgactacgtgaaggccggcgtgatgttcgaaggcttcgaccag
ttcgatgccggcttcttcggctacacgccccgcgaagccgagaacctcgatccgcagcag
cgcgtgtttctcgaatgcgcctcggcagcgctcgaacatgccggctgcgaccccgagcgc
tggccgggcaaggtcggcgtgtatgcgggcgagggcgccaacgtctacctgatccgcaac
ctgttgccgtccttcggcctcggtgcgcacaccggcattgccgacctgctcggcctcatg
agcggcaactccggcgggtcgctctgcacgcgcgtggcctacaaactgaacctgcgcggc
ccggccgtgagcgttcagaccgcctgctcgacctcgctcacggcagtgcacaccgcctgc
caggcgctcctgagccacgactgcgacatggccctggccggcggcgtgtggctcaacctg
ctgcaagagggcggctaccgctaccaggccggcgcgatcctctcgcccgacggccattgc
cgcgccttcgatgccgatgcggccggcacggtgatcggcagcggcgccggcgtcgtctcg
ctcaagcgcctcgacgaagcgctgcgcgacggcgacaccatccatgctgtcatcaagggc
accgcggccaacaacgacggctcggccaaggtcggcttcaccgcacccagcattgacggg
caggccgaggtcatccgcgcggcgcaactgatcgcgggcgtctcggccgacaccattggc
tacatcgagacgcacggcaccggcaccacgctgggcgacccgatcgagatcgcggcgctc
acgcaggccttccgcgccgacaccgagcggcgcggcttctgcgcggtcggttcggtcaag
accaacatcggccacctcgatgcggcggccggcgtggcggggctcatcaaggccacgatg
gcgctcaagcacggcgtgctgccgcccagcctgcatttcacgaagcccaacccgcagatc
gatttcgcgagcagtccgttctatgtgaacgcgcagcgccagccctggcccgaaggccgc
acgccgcgccgcgcgggcgtgagttcgttcggcatcggcgggaccaacgtgcatgtggtg
ctcgaagaggcaccggtggcccgtccgtctgcacaagcgaaggcaccagcctggcagatc
ttgccgctctccgcccgcaacaccgacgccctgcagcaagccgcgcagcggctggccagt
catctcgaagaagcaggctccggcacatcgctcgccgatgtcgcgcagacgctgcagacc
ggccggcgcgcgctggcggttcgcggcgcagtcgttgccgacggatcggcaaccgccgtc
gaggcgctgcgtgcgcccgaaagcgacttcgaccaggcgagcggcattcccgcgtcggcg
cccgaggtcgcgttcctgttcccgggcggcggcacgcagcacgcgaacatggggctcgcg
ctgtaccgcgaccatccggcgttccgccaggagatcgatcgctgctgcgacgcgctgcgc
gatgcgatgggcatggacctgcggcaactgctctacccggccgtcggcggcgaagctgct
gccgacgagaagctcggtcgcatcgaatacacacagccgctgctgttcatcgtcgagtac
gcgatggcgcgcctgtggatgtcgcgcggcgtgcagccggccgtgatgttgggccacagc
ctgggcgagtacgtggccgcgtgtctggccggcgtgttcagcctggaagatgcgctgcgc
atcgttgccacgcgcgggcggctgatgcagtcgatggcgccgggcgcgatgaccgccatc
gcgctgtcggaatccgaactcgcgccgttcctggccaccggctgcgacatcgcggcgatc
aatggcgagcaactgtgcgtgctcgccgggccgatggcggccatcgaggcggccgagcag
cagctgttcgcgcgcgggctgatgccgcgccgcctgctggtctcgatcgcctcccattcg
gcgatgaccgagtccatcgtggccgagctgcagcaggtggtcgcttccgtgccgcggtcc
gcgccccgcattcccttcatctccaacgtcaccggcaagcccatcactgcgcagcaggcg
gtcgatccggcctactggggccagcacctgcgcggcacggtgcgcttcgcggacggcatg
gcggaactgctgcgcgtccaaggccgcgtgctgctcgaagtcggtcccggcgagacgctg
gccggcctcgcgcgccagcacccgctggccgattcggcggcggccatcctgtcgagccag
gcccatccgcagaagcaggcacagaacgaacgccagatggcgagcgtgatcggccaactc
tggtgcgcgggtgtcgatatcgattgggctgcgtgccatccgggacggcaggcacgccgc
gtgccgctgccgacctatccgttccagcgccgctcctattggacggacatgcccgaggcg
ggcagcgaagcggcgacctcgcccgtgcagaagccgggcgatccattccacgtgccggtc
tggcaacgtacggagcccgcgggtatgccaacggctcttacgccggccgacggctgcacg
ttggtgttcgcggagacgagcggcttgaccgacgccctgattcgccaattgcaggccgaa
gcgcccgcgcacccggtgttccgcgtgacgccggggagcggctatgccgaaacgggagcg
caccagttcacggtacgcccgggcgagcgtgcggatcacgaagagctcctgcgcaaggtg
caggccgaatccggaccggtcgccaaggtctatcacctgtggagcgtggacggccagccg
tcgtcttcgtcgtctttgccgcaatcggaggacgtgctcgagcgcggctacttcagcctg
ctggcgctgattcaggccatcgacagcacctctggcggacgtgcgcgcgagctctcgatt
gaagtcatcgcgaaccagatcgaagacgcctccggcctcgagccgctgtgccccgagaag
gcgacgctgttcagcctctgcaaggtgatcgcgcaggagtatccgcacatcgcttgccgg
gtgacggacatcgtgttgcccgtgccgggcagcgctgctgaagcatggctggcacggcag
ctcgccgcgccggcgcaggcgccgcacgacgaaacgctcgtggcctatcgcggcccgcat
cgctgggtcaagacctatgcgccgctgccgtccggctccgcgccgcaacagcgcctgcgc
tccaagggcgtctacctgatcaccggcggtctcggcggcgtggggctcgcggtcgcgcgg
cacctggccgagtcatggcaggcgcggctggtgctgctgggacgcacaccgctgcccgaa
cggagcgagtgggaggctctcgtcgccgacgaagcgcaaccccaggcgctgcggaccagg
ctcgcgcaactgatcgaactcgaaaatctcggcggcgaagtgctcgtcgtcgctgccgac
gtggccgatgcggcctcgatgcaagccgccgtcgcagaggcccgcgcccgcttcggcatg
gtgcagggcgtggtgcatgcggccggtcacgcgaacagcggaatgatcgcaacccgcacc
cgcgccgcaatcgacgaagtcttcgcccccaagttgcaaggcacgcgctttctgctcgac
gcactgcgcgacgagccgctcgatttcgtgctgctgtgctcgtcgatctccagcatggcc
ggtggcctcggcatgagcgactacgccgccgcgaacgcctacctcgacgggctggccgca
ctgtggcaacgcagtgcgacgtaccccgtcatctcggtcaactgggacgcctggcgcgac
ctcggcatggccgcaggccgcgtgctgcccgacggcatcggcatggacggacccgagggc
gcgcgggcggtggaacgcatcgtcaacggcccggcgttcgcgcaggtcgtgatctccacc
accgacctgaaccaacggctcggcgaactggacaacggcatgctcgacctgctggagacc
ggcccggccgcgaagaagaagcgccgcgaacatccgcgccccgcgctggccacacctttc
gtcgcgccggaaggcgagctggagaacgtgctcgcgggcatctggcaggacatgctgggc
attgccagcgtcggcatcgatgacaacctgttcgagctgggcggcgactcgctgctcgcg
atccagatcctggcgcgggcccgcaaggcctacgaagtcgaactgcatccggccgccttc
ttcaaggcacccaccctccgcgaccttgcgatcctggtcgagacccggctgatcgaggaa
atcgaggccgccgcacccctcgatgcgccggccgatgccgaacccgatcgctcgcccgca
ttcgtctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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