KEGG   Variovorax paradoxus EPS: Varpa_4553
Entry
Varpa_4553        CDS       T01392                                 
Name
(GenBank) conserved repeat domain protein
Organism
vpe  Variovorax paradoxus EPS
SSDB
Motif
Pfam: DUF11 SdrD_B
Other DBs
NCBI-ProteinID: ADU38719
UniProt: E6UVC5
Position
complement(4953650..4960828)
AA seq 2392 aa
MAAAVAAMAVLCCTVAGPVAHAAAPAGGTVLRNVATATYVPAGLAQTETSSSNSVVASVL
PVEALVLTHDQSVDRPPATVVTLSHLLTNTGNVPSSYTIGLANNGAGCPADALDLSALRV
VRDSNNNGVVDAADPVLPLGTAGAIALQPGETAALLVQGTVPATATGSACVVLSATTALQ
KLSAVNRDTVTAGDVAVLSLTKSASYPGLVVPGSTRIDFTVSGTNIGARDARPGNTAAPA
GTPVLVNGTPTALLLVRDLVPAGTRYIAGSLQSTAAGAVRLFRLPGDADFSYRTVDDASA
VEVAIGVPAPLARNASIAMQFAVQVKADQTGDIRNTAQGYYNDGVAPAVSPSNTVVITSS
QNRIGVAKAASTPRMNHGADGQLDGTATVSFSVNVRNYGAVWLYGVQVADLMEGSGTTQF
GAFTPAAVPAANQYTIVPGSLAIASNQGNGVSGTVAAVNSAFNGTAGAQSLLAPGAVLPV
GAQFTVRFDVRFNVGGRAGTLLNTARAQGALTPGGAPVAFDDSVNGSNPDADGDGNPNND
SSPTPVSTQLPTLSLVKTASAPRRVAQGVYELDYHLKVTNTGVAAAPNLRLIDNLNCTFD
MDKPDGLVAAWELIAPPKARNGVLNAAAGFTGRASCDRESLASSDPFRLPTEAVLSVTDG
SRALAPGQSEELSFTVRITQKPAAIGGRVAVTNKGWAAAFDQNTVNVTPAMLVVASASSV
QSLLVDPQGVVYNAVTREPVAGAVVTFTRQSCSSGAVTPITADQLYGGASGLYTVNANGS
ISMVTGADGGYQFYLQSPPVTGSCTYAIGVVPPAGSGYVAPSQLIPATAGTFSRCGAIVP
NAGAPQGADATTHYFSVNAGLDAAGAACDVVHNHIPLDPGNVLGLVLRKEGSKRQAEFGD
FMDYALVVTNKTGFPVTGVRLSDTLPPGFAYVAKSVRLNGSAAVDPVGGAGPQLFFDYPA
LKLGVDQSATVRYRVRIGVGAPTNGDAVNRARANSGPMQSNLASWTVRVTGGVFSDDAFM
FGKVYMDCKRDGRQEGDDEIGVPGVRLYMEDGTHVITDVEGKWSLYGLKPLTHVLRVDQT
TLPPGAQLAVLDNRNAGRPESRFVDLKKGEFHKANFIVGNCDAPDVMKDVIARRAAIAAS
PDTEAEAQVRMRLDPEGRIVPVGDVRSLPASGQSSVTGSTGSTGSTLANSAPLIAMPVAP
SGASSFVNGASGTASGTLGASAAPAPTPAGSLFAALNGLPTNAQGASATGGGAAGVGAFA
SRPVNTSTQMLAPRANPLLPQAVPSPVELEALLPRIEGNALGFIDLKDGDTLPAQSVNVR
VKGEAGLALRLTVNGKVIEERRVGKKTQLDAKKLGAWEYIGVVLQPGANRLLLEGMDPFG
NARGTAQHITVVAPDKLGAIQVELPVSAQADLRTPVIVKVRLTDAAGVPVTARTQLTLET
DRGRWLDEDLNPAEPGTQVFMEGGAAEFRLLPPGEPGDARLRVTAGSFVKEVRLALLPEM
RPMIGVGIVEGVLDLTRRGGVPLGAMPAGAAFEAELTGLADESNNRRAAARSAFFFKGTV
KGEYLLTAAYDSAKTRDDRLFRDIRPDEFYPVYGDSSVKGFDAQSTQKLYVRIDKNRSYL
LYGDFTTASSTEVRNLSQNNRALTGLKHVYDDGNVRATSFFSRTAQTQQVEEFRAVGTSG
PYYLSATGGEFVDNSEQVEVVVRDRNQPDLVLQRTTVARFVDYTIEPLTRRILFTHAISS
VDANLNPQSIRVTYEVDAGGPKFNVAGTDVQVKVTDNLQLGVVASTDENPENRRKLGALT
AVARVGENTTMAGEWVRTESDKNGKGSGGRVELRHQTEDLAVVALASKTSTGFDNPGASF
SAGRTEASARAEYRIDTSTALRGEALFSQDALLGGSRRGFTASVQKKVGEQLVAEVGLRH
GQSGAGLGTSSGFDYGQISTYSGNLGSGVGAGNVTALGAAATANANAEDLTTVRARISAQ
VPGLPQANVFVEGEQDIRKSDRHVLAIGGNYAVTDKTRIYGRYELVSSLYNQDELGTTGS
NNVGILGIESSYMEGGRVYSEYRLADSIDGRAAQAATGVRNTFKLNDQWRLTGGIEHTRQ
LGGPVNSGNTGTGYAGGLGQSTAITGGVEYGTERIKASGVLEGRRGDDANTRLFSAGFGY
KIDRAWSLLARSVMSDSEGQGTNAGNEHHLARHQIGLAYRPVDTDSWNALMRYERRSERV
VGTGSSTGALDGASVFGSGSGNASLPGSTSADIVSAHVNYNPRPGTVINGRYAAKWSRAD
DGWLKSTYWAHLLQARYTQDIDKDWDFGIQAGLLYGKGGALQKTLGVEVGYQAMTNLWVS
VGYNVVGLKDRDLTANEYTSKGAYIRLRFKFDETGLGFPSAGAANANAAAGP
NT seq 7179 nt   +upstreamnt  +downstreamnt
atggccgctgccgtcgctgcgatggcggttctgtgctgcacggtcgccggacctgtcgcg
cacgccgcggcgccggccggcggcaccgtgctgcgcaacgtcgccaccgccacctacgtg
ccggccggccttgcgcagaccgagacttcgagctccaacagcgtcgtcgccagcgtgctg
ccggtcgaggcgctggtgctcacgcacgaccagtcggtcgaccgtccgccggccaccgtc
gtcacgctgagccacctgctcaccaacaccggcaacgtgccgtcgagctacaccatcggc
ctggcgaacaacggtgcgggctgtccggccgatgcgctcgatctctcggcgctgcgcgtg
gtgcgcgacagcaacaacaacggcgtggtcgatgcggccgatccggtgctgccgctgggc
accgccggcgcgatcgcactgcagcccggcgaaaccgcggcgctgctggtgcagggcacc
gtgcccgccacggccaccggcagcgcctgcgtggtgctcagcgccaccaccgcgctgcag
aagctcagcgcggtcaaccgcgacaccgtcaccgcgggcgacgtggcggtgctctcgctc
accaagtcggcgagctatccgggtctcgtggttcctggcagcacgcgcatcgacttcacg
gtatccggcacgaacatcggcgcgcgcgacgcccgccccggcaacaccgccgcacccgcc
ggcacgccggtgctggtgaacggcacgcccaccgccctgttgctggtgcgcgacctcgtg
cccgcgggcacgcgctacatcgcgggcagcctgcagagcacggcggccggcgcggtgcgg
ctgttccgcctgccgggcgatgcggacttcagctaccgcaccgtggacgacgcctcggcc
gtcgaagtggccatcggcgtgccggcgccgctggcacgcaatgcgtcgatcgcgatgcag
ttcgcggtgcaggtcaaggccgaccagacgggggacatccgcaacaccgcgcagggctac
tacaacgacggcgtggcgccggcggtgtcgccctcgaacacggtggtcatcacctcgagc
cagaaccgcatcggcgtcgccaaggcggcctcgacgccgcgcatgaaccacggcgcagac
ggccagctcgacggcaccgccacggtgagcttcagcgtcaacgtgcgcaactacggcgcc
gtgtggctctacggcgtgcaggtggccgacctcatggaaggcagcggcaccacgcagttc
ggcgccttcaccccggcggccgtgccggccgcgaaccagtacacgatcgtgccgggctcg
ctggccatcgcgagcaaccagggcaacggcgtgagcggcaccgtggccgccgtcaacagc
gcgttcaacggcaccgccggcgcgcagagcctgctcgcgcccggcgcggtgctgccggtg
ggtgcgcagttcaccgtgcgcttcgacgtgcgcttcaatgtcggcggccgcgccggcacg
ctcctgaacaccgcgcgtgcgcaaggtgcgctcacgccgggcggcgcgcccgtggctttc
gacgattcggtcaacggcagcaaccccgatgccgacggcgacggcaacccgaacaacgac
agctcgcccacgccggtgtccacgcagttgcccacgctctcgctggtcaagacagcctcg
gcaccgcggcgcgtggcgcagggcgtgtacgagctcgactaccacctgaaggtgaccaac
accggcgtggccgcggcgccgaacctgcggctcatcgacaacctgaactgcactttcgac
atggacaagcccgacggcctcgtggccgcctgggaactgatcgcaccgccgaaggcgcgc
aacggcgtgctcaacgcggcggccggcttcacgggccgcgcgagctgcgaccgcgagtcg
ctggcgagcagcgacccgttcaggctgccgaccgaagccgtgctgagcgtgaccgacggc
agccgcgcgctcgcgccgggccagagcgaagagctgtcgttcaccgtgcgcatcacgcag
aagccagcggccatcggtggccgcgtggcagtcaccaacaagggctgggccgcggccttc
gaccagaacacggtgaacgtcacgccggccatgctggtggtggcgagcgcgagctcggtg
cagtcgctgctggtcgatccgcagggcgtggtctacaacgcggtcacgcgcgagccggtg
gccggcgcggtcgtcaccttcacgcgccagtcgtgcagcagcggggcggtcacgccgatc
accgcggaccagttgtacggcggcgcgtcgggcctgtacacggtcaatgccaacggcagc
atctccatggtcaccggcgccgacggcggctaccagttctacctgcagtcgccgccggtc
accggctcttgcacctacgcgatcggcgtggtgccgcccgcgggcagcggctacgtggcg
ccgtcgcagctcatcccggccacggccggcaccttcagccgctgcggcgccatcgtgccg
aatgccggcgcgccgcaaggggcggatgcgaccacccattacttctcggtcaacgcaggc
ctcgatgccgcgggcgccgcctgcgacgtggtgcacaaccacatcccgctcgatccgggc
aatgtgctcgggctggtgctgcgcaaggaaggcagcaagcgccaggccgagttcggcgac
ttcatggactacgccctggtcgtcaccaacaagacgggctttccggtcaccggcgtgcgg
ctgtccgacaccctgccgccaggctttgcctatgtggcgaagagcgtgcgcctgaacggc
tcggccgcggtcgatccggtcggcggcgcgggcccgcagttgttcttcgactacccggcg
ctgaagctgggcgtggaccagtcggccacggtgcgctaccgcgtgcgcatcggcgtgggt
gcacccaccaacggcgatgccgtcaaccgcgcgcgcgcgaactcgggcccgatgcagtcg
aacctggcgagctggaccgtgcgcgtgaccggcggcgtgttctccgacgacgccttcatg
ttcggcaaggtctacatggactgcaagcgcgacgggcggcaagagggcgacgatgaaatc
ggcgtgccgggcgtgcgcctctacatggaagacggcacccatgtcatcaccgacgtggaa
ggcaagtggagcctgtacggcctgaagcccctcacgcacgtgctgcgcgtcgaccagacc
acgctgcccccgggggcgcagctcgcggtgctcgacaaccgcaatgccggccgtcccgag
agccgtttcgtcgacctgaagaagggcgagttccacaaggccaacttcatcgtcggcaac
tgcgacgcacccgacgtgatgaaggacgtgatcgcgcgccgcgcggccattgccgccagt
cccgacaccgaagccgaggcgcaggtgcgcatgcggctcgaccccgaaggccgcatcgtg
ccggtgggcgacgtgcgctcgctgcctgccagcgggcagtcgtcggtcacgggcagtacc
ggcagcaccggttccacgctcgccaactcggcaccgctcatcgcgatgccggtggcaccg
tcgggcgcaagcagcttcgtcaacggcgcatcgggcacggcgagcggcacgctcggcgcc
agcgccgcgccggcacccacgcccgccggcagcctgttcgcggcattgaacggcctgccc
accaacgcgcagggcgcttcggccacgggtggcggtgcggcgggcgtgggcgccttcgcc
agccggccggtcaacaccagcacccagatgctcgcgccgcgcgccaacccgctgctgccg
caggccgtgcccagcccggtcgaactcgaagcactgctgccgcggatcgaaggcaacgcc
ctcggcttcatcgacctgaaggacggcgacacgctgccggcccagtcggtcaatgtgcgc
gtgaagggcgaggccggcctcgcgctgcgcctcaccgtcaacggcaaggtcatcgaggag
cggcgcgtcggcaagaagacccagctcgatgcgaagaagctcggcgcctgggaatacatc
ggcgtggtgctgcagcccggcgccaaccgcctgttgctggagggcatggaccccttcggc
aacgcgcgcggcaccgcgcagcacatcaccgtggtcgcgcccgacaagctcggtgccatt
caggtcgagctgcccgtgtccgcgcaggccgacctgcgcacgccggtgatcgtgaaggtg
cgcctgaccgacgccgccggcgtgcccgtgaccgcgcgcacccagctcaccctggaaacc
gaccgcggccgctggctcgacgaagacctgaaccccgccgagccgggcacgcaggtcttc
atggaaggcggcgcggccgagttccgcctgctgccgcccggcgaacccggcgatgcgcgc
ctgcgcgtgacggccggcagcttcgtgaaggaagtgcgcctcgcgctcttgcccgagatg
cggccgatgatcggcgtgggcatcgtcgaaggcgtgctcgacctcaccaggcgcggcggc
gtgccgctgggcgcgatgcctgccggcgccgccttcgaggccgagctcaccggcctggcc
gacgaaagcaacaaccgccgtgcggccgcccgcagcgccttcttcttcaagggcaccgtc
aagggcgagtacctgctcacggccgcctacgactcggccaagacgcgcgacgaccgcctg
ttccgcgacatccggcccgacgagttctatccggtgtacggcgactcgtcggtgaagggc
ttcgacgcgcagagcacgcagaagctctacgtgcgcatcgacaagaaccgctcgtacctg
ctgtacggcgacttcaccaccgccagcagcaccgaggtgcgcaacctgagccagaacaac
cgcgcgctcacgggcctgaagcacgtctacgacgacggcaacgtgcgcgccaccagcttc
ttctcgcgcactgcgcagacgcagcaggtggaagagttccgcgcggtcggcacctcgggc
ccgtactacctgagcgccacgggcggcgagttcgtcgacaacagcgagcaggtcgaggtg
gtggtgcgcgaccgcaaccagcccgacctggtgctgcagcgcacgacggtcgcgcgcttc
gtggactacacgatcgagccgcttacgcgccgcatcctcttcacgcatgcgatctcctcg
gtcgatgcgaacctcaatccgcagtcgatccgcgtgacctacgaggtcgacgccggcggg
ccgaagttcaacgtggccggcaccgacgtgcaggtgaaggtgaccgacaacctgcaactg
ggcgtggtcgcgagcaccgacgagaacccggagaaccgccgcaagctcggcgcgctcacc
gcggtggcgcgcgtgggcgagaacaccaccatggccggcgagtgggtgcgcaccgagtcc
gacaagaacggcaagggcagcggcggccgcgtggagctgcgccatcagaccgaggacctc
gccgtggtggcgctggccagcaagaccagcaccggcttcgacaaccccggcgcgagtttc
tcggccgggcgcaccgaagcgtcggcgcgcgccgagtaccgcatcgacaccagcaccgcg
ctgcgcggcgaggcgctcttcagccaggacgcgctgctcggcggcagccgccgcggcttc
actgccagcgtgcagaagaaggtcggcgagcagctggtcgccgaagtgggcctgcgccac
ggccagagcggcgcgggcctgggcaccagctccggtttcgactacggccagatctcgacc
tacagcggcaacctcggcagcggcgtgggcgccggcaacgtcacagcgctgggcgctgcg
gccaccgcgaatgcgaatgccgaagacctgacgaccgtgcgcgcgcgcatctcggcccag
gtgccgggcctgccgcaggccaacgtgttcgtcgagggcgagcaggacatccgcaagtcc
gatcgccatgtgctggccatcggcggcaactacgccgtgaccgacaagacgcgcatctac
ggccgctacgagctggtctccagcctctacaaccaggacgagctgggcacgaccggctcg
aacaacgtcggcatcctgggcatcgagagcagctacatggaaggcggccgcgtctacagc
gaataccggctggccgacagcatcgacggccgcgccgcgcaggcggcgaccggcgtgcgc
aacaccttcaagctcaacgaccagtggcgcctgaccggcggcatcgaacacacgcgccag
ctcggcggcccggtcaacagcggcaacaccggcacgggctacgcgggcggcctcggccaa
tcgacggccatcaccggcggcgtcgaatacggcaccgagcgcatcaaggcgagcggcgtg
ctcgaaggccggcgtggcgacgatgcgaacacgcgcctgttcagcgccggcttcggctac
aagatcgaccgcgcgtggagcctgctcgcacgcagcgtgatgagcgacagcgaagggcag
ggcaccaacgcgggcaacgaacaccacctcgcgcgccaccagatcggcctggcctaccgc
cccgtcgacaccgacagctggaatgcgctgatgcgctacgagcgccgttccgagcgcgtg
gtcggcacaggcagttcgaccggtgcgctcgacggcgcgagcgtcttcggctcgggctcg
ggcaatgcgagcctgccgggcagcacgagcgccgacatcgtctcggcccacgtcaactac
aacccgcgtcccggcaccgtgatcaacgggcgctacgcggccaagtggtcgcgcgccgac
gacggctggctcaagagcacctactgggcgcatctgctgcaggcgcgctacacgcaggac
atcgacaaggactgggacttcggcatccaggccggcctcttgtacggcaagggcggcgcg
ctgcagaagacgctgggcgtcgaggtgggctaccaggcaatgacgaacctgtgggtctcg
gtgggctacaacgtcgtcggcctcaaggaccgcgacctcaccgccaacgaatacaccagc
aagggcgcgtacattcgcctgcgcttcaagttcgacgagacggggctcggcttcccctcg
gcaggcgctgcgaacgcgaacgcggcggccggcccatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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