KEGG   Variovorax paradoxus EPS: Varpa_4762
Entry
Varpa_4762        CDS       T01392                                 
Name
(GenBank) Radical SAM domain protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00790  Folate biosynthesis
vpe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    Varpa_4762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpe03016]
    Varpa_4762
Enzymes [BR:vpe01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     Varpa_4762
Transfer RNA biogenesis [BR:vpe03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Varpa_4762
SSDB
Motif
Pfam: Radical_SAM
Other DBs
NCBI-ProteinID: ADU38923
UniProt: E6UYM0
Position
5184739..5185377
AA seq 212 aa
MTYSVKEIFYTLQGEGGQAGMPAVFCRFAGCNLWTGREEDRASAVCRFCDTDFVGTDGTL
GGKFKTADQLADTIAAQWPANDAEHRLVVLTGGEPLLQVDAALVDALHARRFRIAVESNG
TVAAPEGIDWLCISPKAGAPWVQQRGQELKLVWPQTAFDLDAMARTGDFTHRFLQPMDGP
DRVANTELCIAECMRQPAWRLSVQTHKITGIR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacctacagcgtcaaggaaatcttctacacactgcagggcgaaggaggtcaggcgggc
atgccggccgtgttctgccgctttgccgggtgcaacctctggacgggccgcgaggaagac
cgcgccagtgccgtctgccgtttctgcgacaccgatttcgtcggcaccgacggcacgctg
ggcggcaagttcaagaccgccgaccagctcgccgacaccatcgccgcgcagtggcccgcc
aacgatgccgagcaccggctggtggtgttgaccggcggcgaaccgctgctgcaggtggat
gccgcgctggtcgatgcgctgcatgcgcggcgctttcgcatcgcagtcgaaagcaacggc
acggtcgcagcgcccgaaggcatcgactggctctgcatcagccccaaggccggcgcgcca
tgggtgcagcagcgcgggcaggagctcaagctggtgtggccgcagaccgcgttcgacctc
gatgcgatggcgcgcaccggcgacttcacgcatcgctttctgcaaccgatggacggcccc
gaccgcgtggccaataccgaactctgcatcgccgaatgcatgcgtcagccggcctggcgc
ctcagcgtgcagacccacaagatcaccggaatcaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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