KEGG   Variovorax paradoxus EPS: Varpa_5534
Entry
Varpa_5534        CDS       T01392                                 
Name
(GenBank) type VI secretion protein, VC_A0107 family
  KO
K11901  type VI secretion system protein ImpB
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_5534
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_5534
SSDB
Motif
Pfam: T6SS_VipA
Other DBs
NCBI-ProteinID: ADU39689
UniProt: E6VAE5
Position
complement(6024274..6024789)
AA seq 171 aa
MATKRQSVQKRLQKVRPPRVQLTYDVELGDAIEKKELPFVVGVVADLAGQSEVEQPKLKD
RKFVNVDRDNLDDVMKGLAPRAAYQVENKLDERGGTFGVDLTFNSMDAFSPEAVVDQIEP
LKRLLDARTKLADLRNKMAGNSKLEDLLADVLNNTEQLQRLGQGAGKKDGS
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcgaccaaaagacagagtgtgcaaaagcgcctgcagaaagtgcgcccgccgcgcgtg
caactcacgtacgacgtggaactcggtgacgccatcgagaaaaaggaattgccattcgtc
gttggcgtggtcgccgacctggctggccagtccgaggtcgagcagcccaagctgaaggac
cgcaagttcgtcaatgtcgaccgcgacaacctggacgacgtcatgaagggcctggccccg
cgcgcggcctaccaggtggagaacaagctcgacgagcgcggcggcaccttcggcgtcgac
ctcaccttcaattcgatggacgccttctcgcccgaggccgtggtcgaccagatcgagccg
ctcaagcgcctgctcgacgcgcgcaccaagctggcggacctgcgcaacaagatggccggc
aacagcaagctcgaagacctgctggccgacgtgctgaacaacaccgagcaactccagcgc
ctggggcagggcgccggcaagaaggacggaagctga

DBGET integrated database retrieval system