KEGG T02761: M634

Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_15945

Entry

M634_15945        CDS       T02761

Name

(GenBank) ATP-dependent helicase

K03580

ATP-dependent helicase HepA [EC:5.6.2.-]

Organism

vpf Vibrio parahaemolyticus O1:Kuk FDA_R31

Brite

KEGG Orthology (KO) [BR:vpf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpf03021]
    M634_15945
Transcription machinery [BR:vpf03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     M634_15945

SSDB

Motif

Pfam:

RapA_C Tudor_1_RapA Tudor_RapA Helicase_C SNF2-rel_dom ResIII DEAD AAA_34 RelB_N AAA_22 FliT

Other DBs

NCBI-ProteinID:

AGQ91820

Position

I:complement(3298641..3301550)

AA seq 969 aa
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
SLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESNSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRGEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSTLDEIIEESAKLNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSESVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGITRFLPKT
PIRLMMDSRGNDLSAQVEFEGFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLVEEKV
EAVRKQAQQDMQQSLNAELERLQALKAVNPNIRDEEIEAIEAQIKELTGYINQAQVQLDS
LRLIVVSHN

NT seq 2910 nt +upstreamnt +downstreamnt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtaacgtttaacgtcggtgatgtc
atcgattgccaagaaggttggtctctgaaagttgaagaagtactggaagatgaaggtctg
tacacctatttcggtactcgtgaagacacgcaagaaaccgcagttgttctgcgtgagatt
ttccttagcaaccaaattcgtttcaacaaacctcaagataagttgtacgccggtcaaatc
gaccgcatggacaacttcgttcttcgttaccgtgcgctaaccaaccagtttgaacagcac
aagagcccaatgcgtggcttgtgtggtatgcgagcaggtttgatccctcatcagctttac
atcgcgcacgaagtcggtcgccgtcacgcgccacgcgttttgttggcggatgaagtaggt
ttgggtaagaccattgaagcgggcatgatcatccaccagcaagtgctgtctggtcgtgct
gaacgcattttgattgtggtgcctgaaacactgcaacaccaatggctagttgagatgatg
cgtcgtttcaacctgcatttctctatcttcgacgaagagcgttgtattgaagcattcgcg
gatgctgaaaacccatttgatactcagcaatacgtgctgtgttcactagatttcctacgt
aagagccgcaagcgttttgaacaagcgttggaaggtgagtgggatctgcttgtcgtcgat
gaagcgcatcaccttgagtggagccaagacaaaccaagccgtgaataccaagtggtagaa
agcttggctgaacgaactccgggcgtgttgctactgacggcaacaccagaacagcttggt
cgtgaaagccactttgctcgtctacgcctgctggatcccgatcgtttctatgattacgaa
gcgtttgtcgaggaagaagagcaatacgcgcctgtagcggatgcgattacttcactattc
tcaggcgaaaagctgcctgatgaagcgaaaaaccagatcactgagctgttgtctgaacaa
gacgtagaaccacttttccgcattatcgaaagcaacagcgatgaagaggcgaaagcatca
gctcgccaagagctaatcgataacctaatggaccgtcacggtacggggcgtgttttgttc
cgtaacacgcgtgcggcaatcaaaggtttcccagcgcgtaatgtgcaccttatgccgatg
gatatcccacagcagtacaccacgtcaatgcgtgtggcagggatgattggcggtaagatg
agttctgaagcgcgtgcgatgaagaacttgtacccggaagaaattttccaagaatttgaa
ggcgatgacgcaagctggtggcagtttgactcacgtgtgaactggctacttgaaaaagta
aaagagaaacgcggcgagaagattctcgtgattgcttctcgtgcgagcacggcattgcaa
ttggagcaagcgctgcgtgaacgcgaaggcatccgtgcgacggtcttccacgaaggtatg
tcgattcttgagcgcgacaaagctgcggcttactttgcgcaagaagaaggcggtgcacag
gttctgatctgtagcgaaatcggttctgaaggtcgtaacttccaatttgccaaccaattg
gtgatgttcgacttgccattcaacccagacttgcttgaacaacgtattggtcgtttggac
cgtatcggtcaaaaccgcgatatcgacattcatgttccttacctgaaaggtacatcgcaa
gcgatccttgcgcgttggttcgatgaaggtctgaacgcctttgcagaaacctgcccgaca
ggtcgtgcggtttatgacaagtactcagacgctctgattgagattctggcgtcaggagat
accagcactctggatgagatcatcgaagaatcagcgaagctgaacaaagaattgaaatcg
caactagagcaaggtcgtgaccgcttgctagaaatgcactctaacggcggcgaaaaagct
cagcaaatcgttgagaaaattgaatcaactgatggtgatacaaacctagtcacgtttgcg
ctttctctgtttgatacgattggtttgaaccaagacgacaaaggcgaaaatgcactggtg
gtgacgccatcagagcacatgatggtgccaagctaccctggtttgccatacgaaggtgcg
acgatcacttttgatcgcgataccgcgctttctcgtgaagacatgcacttcatcagttgg
gaacacccaatgatccaaggtggtatcgatcttctgatgagtgaaagtgtggggacttct
gcggtatctctgttgaaaaacaaggcgttgccagttggtactattctgcttgaactgatt
tacgcggtagatgcgcaagcaccaaaacgtagcgggatcactcgtttcttaccgaaaacg
ccaatccgtctgatgatggactctcgcggtaacgatctatcggctcaagtagagtttgaa
ggtttcaaccgtcaacttagcccagtaaaccgtcatcttggcagcaagctggtgacgtct
gtgcaaaaagacgtgcaccgtttgattgaagcgggtgatgtgctggttgaagagaaagtg
gaagccgttcgtaagcaagcgcagcaagacatgcaacaaagcttgaatgcggagctagag
cgtttacaagctttgaaagcggtgaacccaaacattcgtgatgaagagattgaagcgatt
gaagcgcaaatcaaagagctgactggttacatcaatcaagctcaagtgcagctagattcg
ctccgtctgattgtggtgagccacaactaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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