KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_0546
Entry
VPUCM_0546        CDS       T03116                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vph03009]
    VPUCM_0546
Enzymes [BR:vph01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     VPUCM_0546
Ribosome biogenesis [BR:vph03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VPUCM_0546
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Other DBs
NCBI-ProteinID: AHI98504
Position
1:591657..592634
AA seq 325 aa
MAQQIVLTNTVKDSQLGQRLDQAIAELFADFSRSRLKEWLLDGKVQVNGEVVTKPRTKVM
GGEEITLQAELEDEERWEAQDIPLDIVYEDDDIIVINKPRDFVVHPGAGTPDGTVLNALL
HHYPDIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRNITREYEAIAIGRMT
AGGKVDQPIGRHSTKRTLMAVAPLGKPAVTHYRVAEHFREHTRIRLRLETGRTHQIRVHM
SYLQHPLLGDTAYGGRARIPTGASQELTDMIRGFDRQALHAVMLRFEHPITGEELEFHAP
VPDDMVAMTEALRKDTEEYGLPDEF
NT seq 978 nt   +upstreamnt  +downstreamnt
atggctcagcagattgtattaacaaataccgtaaaagatagccagttaggtcaacgttta
gaccaagctatcgccgaattgttcgctgacttctctcgttcgcgcctgaaagaatggttg
ctggacgggaaagttcaagtgaatggtgaagttgtcactaaacctcgcaccaaagttatg
ggtggcgaggaaattactttgcaagccgagctggaagatgaagaacgctgggaagcgcaa
gatatcccactagatatcgtctacgaagatgatgacatcatcgtaatcaataagcctcgt
gacttcgtcgttcaccctggtgctggtacaccagatggtaccgtgctgaatgcattgcta
catcattacccagacatcgcagaagtaccgcgagcgggcatcgtgcatcgtcttgataaa
gacaccacaggtctgatggttgtggcgaaaaccgttccagcgcaaactcgtttggttcgt
gccctgcaaaaacgcaacatcacgcgtgagtacgaagcgattgcaatcggtcgtatgaca
gcgggtggtaaagtggatcaaccaattggtcgccactcgactaaacgcacactcatggct
gtagctcctttgggtaaacctgcggtaacgcactaccgtgtagcagaacacttccgtgag
cacacgcgtatccgtctgcgtttggaaacgggtcgtactcaccaaatccgtgttcatatg
tcttacctacagcatcctctgttaggtgatactgcctacggtggtcgtgcacgtattcct
actggtgcatcgcaggaactgacggacatgattcgtggtttcgatcgtcaggcgctacac
gctgtaatgcttcgttttgaacacccgataactggtgaagaactggaattccatgctcca
gtgccagacgatatggtggcaatgactgaagcgctgcgtaaagacactgaagaatacggt
ctaccggacgagttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system