KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_1271
Entry
VPUCM_1271        CDS       T03116                                 
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vph03400]
    VPUCM_1271
Enzymes [BR:vph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VPUCM_1271
DNA repair and recombination proteins [BR:vph03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VPUCM_1271
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNApolII_N DNA_pol_B_2 DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: AHI99229
Position
1:complement(1416947..1419310)
AA seq 787 aa
MNIQQGFLLTRQARDIKGQTQIELWLATEAGPTQLLINGEKPVFFIAQEHIEQTQNLALS
KSIQVEIRTLELKTFEHTPLAACYTKVTKEALVLQDLLSQQDIVTYEGDIRLADRYLMER
FIKGSVEFTGHQQSRNGFHRIQNAKCRSGDYEPKLHVVSLDLECSEKGILYSIGLDSPHD
SRVIMIGEPEPAETNIQWVQNEKALLEALIAWFKSFDPDVIVGWNVIDFDFRLLHKRAEW
HNMKLMLGRADQPSFFRSSSQSQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQEL
LGEGKEIHNVHDRMDEINRMYRSDKPSLAKYNLQDCVLVNKIFEHTHLLAFAIERSRLTG
VELDRVGGSVAAFTNLYLPQIHRAGYVAPNLHPENWIASPGGYVMDSIPNLYDSVLVLDF
KSLYPSIIRSFLIDPMGLVEGLLLDIGKDDDQAVPGFRGGQFHRSKHFLPEMIEKLWAAR
DVAKKNNEKAFSQAIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIENK
GYQVVYGDTDSTFVSLNGSYSQAEADEVGNHLVEYINSWWQEHLRAEYNLTSMLEIEYET
HYRKFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWTPLAQKFQNTLYRMV
FHGEDPSDYVREVVEKTNKGEFDGQLVYQKRLRRKLHEYQKNIPPQVRAARLADDINAKL
GRPLQYQNRGRIEYLITLNGPEPHEYRNSPIDYQHYIDKQLKPVADAILPFIGTDFETLS
APQMGLF
NT seq 2364 nt   +upstreamnt  +downstreamnt
ttgaacatccaacaaggtttcctacttactcgccaagcacgagacatcaaaggccaaact
cagatagagttgtggctcgcgacagaagcaggtccgactcaactattgatcaatggtgag
aaacccgtgttcttcatcgctcaagaacacattgaacaaacccaaaacctggcgttatcg
aaaagtattcaagtagaaattcgaactcttgaactgaaaacgttcgagcatacccctctc
gcagcttgctatacgaaagtaaccaaagaagcactcgtattacaagatctgctctcacag
caagatatcgtgacttacgaaggcgatatacgactcgctgaccgctatctaatggagcgc
tttattaaagggagtgtggagtttacaggtcatcagcaatcgcgaaatggctttcatcgt
atccagaatgcaaagtgtcgaagtggtgactatgagcctaagttgcatgtcgtttcgcta
gacttggagtgttcagaaaaaggcattctttactccatcggtttggatagccctcatgac
tctcgagtcattatgattggagaaccagaaccagctgaaacaaatattcaatgggttcaa
aatgaaaaagcactactcgaagcattgattgcttggtttaagtcgttcgatcctgatgtt
attgttggttggaacgttatcgacttcgattttcgtctccttcataaacgtgcggaatgg
cacaacatgaagttgatgttgggtcgcgccgatcagccaagcttctttcgtagctcatcc
caaagccaacaggggtttatctcaattcccggacgtgtagtactcgatggcatcgataca
ctaaaaaccgcgacttatcactttcggtcttggtcattagaatcggtttcacaagaatta
ctcggtgaaggcaaagagatccataacgtgcatgaccgtatggacgaaatcaatcgcatg
tatcgctccgataagccttcacttgccaaatacaaccttcaagattgcgtgctagtaaac
aaaatcttcgaacacactcatctcctcgcgtttgctattgaacggtcgaggttgacgggg
gttgagttggatcgcgtcggaggctcagtcgcggcgttcaccaatctttatttgccacaa
attcatcgagcaggttacgtcgcacccaatttgcaccctgaaaactggattgcgagtccc
ggcggttacgtaatggactcaatccctaacctttatgactcagttttagtgctggatttt
aagagtctatatccctctattattcgctctttcttgatcgacccaatgggtttggtcgaa
ggtttattactggacattggtaaggatgacgatcaagccgtgcctggttttcgtggtggt
cagtttcatcgttcgaaacactttttgccagagatgatcgaaaagctttgggcggcacga
gatgttgcgaagaaaaacaacgagaaagccttttctcaagcaatcaaaatcatcatgaac
tcgttttatggcgtattgggctcatcgggatgccgtttctttgatactcgattagcttcc
agcatcaccatgcgtgggcatgaaatcatgaagcaaactaaagtgctgattgaaaacaaa
ggctatcaagtggtttatggagatacagactcaacatttgtctctttgaatggttcatac
agccaagcggaagcggatgaagtcggcaatcacttggttgaatacataaactcttggtgg
caagagcatcttcgcgctgagtacaacctcacttcaatgcttgaaattgaatatgaaact
cattaccgcaagtttctgatgccaactattcgtggcgcggaaacgggctcgaaaaaacgt
tatgcgggtttaattggtgagggagaacaagagcgcattgtattcaaagggctagaaagt
gcgcgtaccgactggacgccattagcgcaaaaattccaaaacacgctctatcgaatggta
tttcacggcgaagacccgagtgactatgtgcgtgaagtagtagaaaaaaccaataagggg
gagtttgatggccaattggtttatcaaaagcgactacgccgaaagctgcatgagtaccaa
aaaaacatcccacctcaagtgcgtgcagcacgtttggccgacgacattaatgccaagctt
ggccgacctttacagtatcaaaatcgtgggcgcatagagtatttgattaccctaaatggc
cctgagcctcatgaataccgtaacagtcctatcgactaccagcactacatcgacaaacag
ctaaagcctgttgcagatgcgattctgccatttatcggcacagactttgaaaccctctca
gcaccacagatgggactgttctaa

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