KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_20565
Entry
VPUCM_20565       CDS       T03116                                 
Name
(GenBank) Choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph00260  Glycine, serine and threonine metabolism
vph01100  Metabolic pathways
Module
vph_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:vph00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VPUCM_20565
Enzymes [BR:vph01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     VPUCM_20565
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C NAD_binding_8 Lycopene_cycl DAO FAD_binding_2 Pyr_redox_2 ApbA FAD_binding_3 Pyr_redox_3 TrkA_N GDI
Other DBs
NCBI-ProteinID: AHJ01686
Position
2:582448..584178
AA seq 576 aa
MKQHYDYIIVGAGSAGCVLADRLSESGQHSVLLLEAGGTDKSIFIQMPTALSYPMNTEKY
AWQFETVQEDGLDGRQLHCPRGKVLGGSSSINGMVYVRGHACDFDQWEEEGAKGWNYQAC
LPYFRKAESWVGGADEYRGDSGPLGTCSGNDMKLNPLYEAFIEAGKEAGYPETNDYNGFQ
QEGFGPMHMTVDKGVRASTSNAYLSRAKKRKNFTLIKRVTVRRVLLEETRLGDKGPEGKK
AVGVEFEKAGSIQQCFAKIEVISSAGSIGSVQLLQLSGIGPKDVLEKAGIELKHQLEGVG
KNLQDHLEVYFQYHCKQPITLNSKLGLVSKGLIGTEWILTRKGLGATNHFESCAFIRSRE
GLKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGTVEVVSSNPNDKPKIEFN
YISTEQDKQDWRDCIRLTREILNQPAMDEFRGDEIQPGLNITTDEQIDEWVKQNVESAYH
PSCSCKMGADDDPLAVLDEQCQVRGIQGLRVVDSSIFPTIPNGNLNAPTIMVAERAADMI
LGNALEKANNTPVWIAPNWQEMQRMHPPKRDLESIS
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgaaacaacactacgattatattatcgtcggtgcgggttcggccggctgtgtgttagcg
gatcgtttgagtgagagcggccagcactcagtattattgttggaagcgggtggtacggat
aagagtattttcatccaaatgccaacagcactttcgtacccgatgaatactgaaaaatac
gcttggcagttcgagactgtacaagaagatggtcttgatggacgccagcttcactgtcct
cgcggtaaagttcttggtggtagctcttctatcaacggcatggtttacgtacgtggccat
gcctgtgatttcgaccagtgggaggaagagggagcgaaaggctggaattaccaggcgtgc
ttaccgtacttccgcaaagctgaatcttgggtcggtggtgctgatgagtaccgcggtgac
agtggtccgctaggtacatgtagcggcaatgacatgaagctgaacccgttgtatgaagcc
tttattgaggctggtaaagaggcgggctatccagaaactaacgattacaacggttttcag
caagaaggcttcggtccaatgcacatgacggttgataaaggcgtacgtgcttcaacctct
aatgcatacttaagccgtgctaaaaagcgcaagaacttcacactcataaagcgagtgact
gtgcgtcgtgtattacttgaagaaacaaggcttggagataaagggccggaaggcaagaaa
gcggtcggcgttgaatttgagaaagcgggttcaattcagcagtgttttgcgaaaattgaa
gtcatttctagtgcaggctcaatcggctcggtacagctacttcaactttccggtattggt
cctaaagatgtactggaaaaagcgggcatcgagttgaaacaccagttggaaggggtaggt
aaaaacctgcaagaccatctggaagtgtacttccaataccactgtaagcagccaatcaca
ctgaacagtaaactaggcttggtgagcaaagggttaatcggtaccgagtggattctgact
cgaaaaggtcttggcgcaactaaccattttgaatcgtgtgcgtttattcgctcgcgtgaa
gggctgaagtggccaaatattcaatatcacttcctacctgcagcaatgcgttatgacgga
caggctgcctttgatggccatggtttccaggtacacgtcggccctaataaaccagagagc
cggggcactgtagaggtggtttcttctaacccaaatgataagccaaagattgagtttaac
tacatctcgaccgagcaagataaacaggactggcgtgactgtattcgtctgacgcgcgaa
attctcaatcaacctgcgatggatgagttccgtggcgatgagatccagcccggcctcaac
atcactaccgacgaacaaatcgatgagtgggtgaagcaaaatgttgagagtgcttatcac
ccatcgtgcagttgcaaaatgggtgcagacgatgatccgctagccgtactggatgagcaa
tgtcaggtacgcggcatccagggtttgcgtgttgtggactcgtcgattttcccaaccatt
ccaaatggtaacttgaacgcgccaaccatcatggttgcagaacgggctgcggacatgatc
ttgggtaacgcactagaaaaagcaaataacactccggtttggattgcaccgaactggcaa
gagatgcagcgaatgcatccaccgaaaagagacttggaatcgatctcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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