KEGG   Vagococcus penaei: BW732_01185
Entry
BW732_01185       CDS       T04715                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
vpi  Vagococcus penaei
Brite
KEGG Orthology (KO) [BR:vpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpi03032]
    BW732_01185
   03400 DNA repair and recombination proteins [BR:vpi03400]
    BW732_01185
Enzymes [BR:vpi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BW732_01185
DNA replication proteins [BR:vpi03032]
 Prokaryotic type
  DNA Topoisomerases
   BW732_01185
DNA repair and recombination proteins [BR:vpi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BW732_01185
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF2996 Toprim_2 HypA zf-TFIIB
Other DBs
NCBI-ProteinID: AQP52970
UniProt: A0A1Q2D3L8
Position
complement(252373..254454)
AA seq 693 aa
MSYKYLVIVESLAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDFENHYDPQYINIRG
KGPVIKELKKYAKKAEKVYLAADPDREGEAIAWHLAHILDLDLADKNRVVFNEITKDAVK
QAFKEPRAINIDLVDAQQTRRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKIIVDRE
EEIRKFKPEEYWSIAGNFVKGRKKFKANFYGVDGKKTKLHTAEDVKEITARLTGRDYDIT
KITKKERKRNPSVPFTTSSMQQEAARKLNFRTRKTMMAAQQLYEGIKLGKGEGTVGLITY
MRTDSTRLSETAVTEAHQFITETYGSDYVANHPKKGKNAKGAQDAHEAIRPSSILRTPDS
VKEFLDKDQFKLYSLIWSRTVASQMSPAILDTMRVDLEQNGVKFVANGSKIKFPGFMKVY
IEGNDEGKEEKENILPDLEEGEQVKSADIEPKQHFTQPPARFSEATLIKTLEENGVGRPS
TYAPTLETIQRRYYVKLNARRFEPTELGEIVNGLMCEFFPQIVDTNFTAEMEKDLDNIAI
AKEKWVDVVDRFYQPFEKVLTEAEVNMEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYA
CSNFPECRNTKAIVKKIGVTCPECKKGDVIEKKTKKNRIFYGCDRYPECEFTSWDKPVGR
DCPKCHHYLVEKKAKGSLQIQCSNCDYKETQQK
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgagttataaatatttagtcattgttgaatccctagcaaaagccaaaacaattgaaaag
tatttaggccgaaattataaagtggttgcaagtgtcggtcatattagagacttaccaaaa
agtaaaatgggtatcgattttgaaaatcattatgatccacaatatattaatattcgtggt
aaaggccctgttattaaagagttaaaaaagtatgctaaaaaagctgaaaaagtttatctc
gcagccgatccggatagggaaggtgaagccattgcttggcacctagcccacattttagat
ttggatttagctgataaaaatcgtgtggttttcaatgaaattacaaaagatgcagttaaa
caagcgtttaaagaaccacgtgccattaacattgatttagttgatgcacaacaaacgcgt
cggattctcgatcgtttggttggttactcaattagcccattattatggaaaaaagtgaaa
aaaggtttgagtgctggtcgggttcaatcggtagctttaaaaattattgttgaccgtgaa
gaagagattagaaaatttaagccagaagaatattggagtattgcaggtaattttgttaaa
ggacgtaagaaatttaaagcaaatttttatggtgttgatggtaaaaaaaccaaattacac
acagctgaagatgtgaaagaaattactgcccgtttaactggtcgtgattatgacatcact
aaaattacgaaaaaagaacgcaaacgtaatccctctgtaccatttacaacgagtagtatg
caacaagaggctgctcgtaaattaaattttagaacgcgtaaaactatgatggcagctcaa
cagttatatgagggaattaagcttggtaaaggtgaagggacagttggtctgattacttac
atgcgtacagattcgactcgcttgtctgaaaccgcagtgacagaagctcatcagtttatt
acagaaacatatggttctgattatgtggctaaccatccgaaaaaaggcaagaatgccaaa
ggggcacaagatgcacatgaggcgattcgaccatcaagtattttgcgtacgcctgattca
gttaaagaatttttagataaagatcaatttaagttatattctttgatttggtcacgaaca
gtagcaagtcaaatgtcaccagctattttagatacgatgcgcgttgatttagaacaaaat
ggcgtgaagtttgtcgctaatggctcgaaaattaaatttcctggttttatgaaagtgtac
attgaaggcaatgatgaaggtaaggaagaaaaagaaaatatcttacctgatctagaagaa
ggtgaacaagttaaatcagcggatatcgagccaaaacaacatttcactcagccaccagct
cgttttagtgaagcaactctcattaaaacgttagaagaaaatggcgtgggacgtccatca
acatatgcgccaactctcgagactattcaaagacgctattatgttaaattaaatgcgcgt
cgctttgagcctactgaattaggtgaaattgtgaatggattgatgtgtgaattcttccca
caaattgttgatacgaattttacagcagagatggaaaaagatttagacaatattgcgatt
gctaaagaaaaatgggtagacgtagtcgaccgtttttatcaaccttttgaaaaagtctta
accgaagcagaagttaacatggagaaaatacaaatcaaagatgaaccagcaggctttgat
tgtgaactctgtggccatccgatggtgataaaattaggacgttatggtaaattttacgct
tgtagtaattttcccgagtgtcgtaacactaaagccatcgtgaaaaagattggtgtgact
tgtcctgaatgtaaaaaaggtgacgttattgagaaaaagaccaagaaaaatcggattttt
tatggttgtgatcgttatcctgagtgtgagtttacttcatgggataaaccagttggacgt
gattgtccgaagtgccatcattacctagttgagaaaaaggctaaaggcagtctacaaatt
cagtgtagtaactgtgattataaggaaacacaacaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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