KEGG   Vagococcus penaei: BW732_08010
Entry
BW732_08010       CDS       T04715                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
vpi  Vagococcus penaei
Pathway
vpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BW732_08010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpi03400]
    BW732_08010
Enzymes [BR:vpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BW732_08010
DNA repair and recombination proteins [BR:vpi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BW732_08010
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 UvrD_C_2 SH3_13 AAA_11 HHH_5 Viral_helicase1 AAA_22 nSTAND3 UvrD-helicase RsgA_GTPase T2SSE AAA_12 Mg_chelatase AAA_28 SLFN-g3_helicase AAA AAA_16 AAA_18 HTH_IclR AAA_29 UvrD_C
Other DBs
NCBI-ProteinID: AQP54169
UniProt: A0A1Q2D6Z7
Position
1661678..1664206
AA seq 842 aa
MLEELEEKKYLIGQIQAIFYENATNFYKVMLVNVKDTNTNYTAQEIVVTGTFGQIQEEEL
YRFYGDIVTHPKYGEQLKVDSYEQEKPSSSAGIIAYLSSAKFTGIGKKTAETIVDTLGLE
ALNRIIEEPDVLLEVPGLNQKKRTVILETLRQNYGMEQAVISLNQYGFGNQLAFAIYQYY
KSETLKTIQENPYQLVEDIEGVGFKKADNLAEQMGISAKAPQRIQAAVIHELFQSCLSTG
NTYFEARQLLQVAQTTLEASRSVEIPADLIAEEIIQMAREGRIVQEGTKIYEKSLYFSEV
GIATSLRRLLTKNKKLPYKEKDVDKNINRIEQLYNITYGESQREALKQAIMSHFFILTGG
PGTGKTTVINGLVTLYAELNGLSLDPSDYTQDIFPILLAAPTGRAAKRMNEMTGLPASTI
HRLLGLTGRENEPLEEARELEGGLLIVDELSMVDTWLANTLLKSLPASMQVIFVGDKDQL
PSVGPGQVLTDLLSIQDIPKHELTDIYRQEDGSTIISLAHGIKNGQTPPDLLENKKDRSF
ITCHANQIESVIEQVVVRAKTKGFSKQDVQVLAPMYRGQAGIDNLNQMMQAILNGNDTQG
RKEVQWLDKVYRIGDKILHLVNSPEFNVFNGDIGEIVGINLAKETEDKVDELVLLFDETE
VVYKRNEWNKITLAYACSIHKAQGSEFKMVILPMVKQYGRMLQRKLLYTAVTRSRDILIL
LGEYDAFKQAIEKEMVPRQTTLAQRLVETDELTLIKEEETLAAYDKEKSHQVQAELVKDI
STKASPIPVAQQVVQESLALDETDTVVVDEEVASTILTLELVRKEMIDPMIGMNGQTPYH
YM
NT seq 2529 nt   +upstreamnt  +downstreamnt
gtgctagaagaattggaagaaaaaaagtaccttattggtcaaatccaagcgattttttat
gaaaatgctactaatttttataaagtcatgctagtcaatgttaaagacacgaataccaat
tacactgcacaagagatagtcgttacgggaacatttggtcaaattcaagaagaagaactg
taccgtttttatggagatattgtgacacatccaaaatacggtgagcagctaaaagttgat
agctatgaacaagaaaaacccagttcttcggcagggattattgcttatttgtcgagtgct
aaatttacagggattggcaaaaaaacagcggaaacgattgttgatacgttaggtttggaa
gccctgaatcggattattgaagagccggatgttttactagaagttcctggcttaaatcaa
aaaaaacggacagttattctagaaacactacgtcaaaattatggtatggagcaagctgtt
attagtttaaatcaatatggttttggtaaccaattagcgtttgctatctaccagtactat
aaatcagaaacacttaaaactattcaagaaaatccttaccaattagttgaagatatcgag
ggtgtaggatttaaaaaagcggataatttagcggaacaaatggggatttcggcaaaggca
ccccagagaattcaagcagcagtgattcatgaattatttcaaagctgcttatcaactggt
aatacttatttcgaagcccgtcaattacttcaagtggcacaaacaacgttagaagcaagt
cgctcggtagaaatacccgccgatctaatcgcagaagaaattatccagatggcacgtgag
ggtcgaattgttcaagaagggacgaagatttatgaaaaatcattatacttttcagaagtc
ggaatcgctacatcactccgtcgtttactgactaagaataaaaaattaccgtataaagaa
aaagatgtcgataaaaatattaatcgaattgagcagttgtataatatcacatacggtgaa
tcacaacgagaagctctgaaacaagcaattatgtcacatttttttattttaactggtgga
cctggtactggtaaaacaacggttatcaacggtctggtcactctctacgctgaattaaat
ggcttatcactagacccatcggactatacgcaagatatttttccaatcctacttgcagca
ccaactggacgagcggcgaagcgaatgaatgagatgactggcttgccggcaagtacaatt
catcgtttgttaggtttgactggtcgtgagaatgaaccgttagaggaagctcgtgaatta
gaaggtggcttattgattgtggatgagttgtcgatggtcgatacttggttggccaatacg
ttgttaaaatcgttaccagcatcgatgcaagttatttttgtaggagataaagatcaatta
ccttcagtgggaccgggtcaagttttaacggatttattgtcaattcaggatattcctaag
catgagttgacagatatttatcgtcaagaagatgggtcaacaattatttctctagcccat
ggcattaaaaacggtcagacaccccccgatttgttagaaaataaaaaagatcggtcattc
atcacttgtcatgccaatcaaattgaatcagtgattgaacaagtcgttgttcgcgccaaa
acaaaggggttttctaagcaagatgtccaagtattggccccgatgtatcgaggtcaagca
ggaattgataatttaaaccaaatgatgcaagccattttaaatggaaatgatactcaagga
cgtaaagaagtccaatggctagataaagtctatcgtattggcgataaaatcttgcatctt
gtgaatagcccggaatttaatgtatttaatggtgatattggtgagattgttgggattaat
ctagcaaaagaaactgaagataaagtggatgagttagttttattatttgatgaaacagaa
gttgtttataaacggaatgaatggaataaaattaccttagcctatgcttgttccattcac
aaagcccaaggtagcgaatttaaaatggttatcttacccatggtaaaacaatacgggcgg
atgttacaacggaaattattgtatacagcggtcacaagaagtcgagatatactaatttta
cttggtgagtacgacgcgtttaaacaagcaattgagaaagaaatggttcctcgtcaaaca
acgttagctcaacgtttagtagaaactgatgaactgacactaatcaaggaagaagagact
ttggccgcttatgataaagaaaaaagtcatcaagttcaagcagagctagtgaaagatatc
tctactaaagcgtcaccaatccctgttgctcaacaggttgttcaggaaagtttagctttg
gatgagaccgataccgtggtggttgatgaagaagtagcatcgaccattttaacccttgag
ctcgttagaaaggaaatgattgacccaatgattggaatgaatggtcaaacaccttatcac
tatatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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