KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_17990
Entry
M636_17990        CDS       T02760                                 
Name
(GenBank) pseudouridine synthase
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpk03009]
    M636_17990
Enzymes [BR:vpk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     M636_17990
Ribosome biogenesis [BR:vpk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    M636_17990
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AGQ98989
Position
I:2116025..2117140
AA seq 371 aa
MSQDNAKRLNKFISETGFCSRRAADKLIEEGRVTINGKQPEMGTKVLPGDDVCVDGKPVA
SKEKPIYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDGDI
VNKILRAGNNHEKEYVVRVDKPITDEFLKQMSSGVRILDTVTLPCKVTKETKFSFRIVLT
QGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEVAEILAMCDGSVGT
EEASKTDSRGRNIRKATDAKLFDSREENQGSTARRNQKTRTFCGNNADEFRHAPNSKKGQ
QKRRQRDDENSRPAKEHYKAKPQGERAKPQGEHGRPQNKPQTPSKPKQHYVNPNTTSKPA
KRTSGTLSLKK
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtcacaagacaacgcgaaacgcttaaataaattcatcagcgaaacgggcttttgctca
cgtcgcgctgccgataaactgatcgaagaaggtcgagtgaccattaacggcaaacagcca
gaaatgggcaccaaagtactacctggtgacgacgtttgtgttgatggcaagcctgtcgct
tcaaaagaaaagccgatttatatcgccctcaacaagccaacaggcatcacctgtacgact
gagcgtgatatccccggcaatatcgtcgatttcatcggtcacaaaaagcgtattttccca
attggtcgactcgataaaccttcggatggtttgatcttcttgactaacgatggcgacatt
gtgaacaagattctgcgcgctggtaacaaccacgaaaaagaatacgtggtgcgtgtcgac
aagccgattacggacgaattcctaaaacagatgtcgagtggtgttcgaatcctcgatacc
gtaacgctcccttgtaaagttacgaaagaaaccaagttctctttccgtattgttttgacg
caaggcctaaaccgtcagatccgccgtatgtgtgaagcactcggctacgaagtatttaaa
cttcgccgcgtacgcatcatgaacatctctctagatggaattccaaatggtaaatggcgt
tacctaaccgatgacgaagtcgcagaaattttagcaatgtgcgatggctcagttggtacc
gaggaagcgtcaaagacagattctcgaggtcgtaatattcgtaaagcgactgatgcgaaa
ctgtttgatagccgagaagagaaccaaggttcgactgctcgtcgcaatcaaaaaacgcgc
accttctgtggtaataacgctgacgagttccgtcatgcacctaactctaaaaaaggccag
caaaagcgccgtcaacgtgatgatgagaactcacgccctgcgaaagagcattacaaagcg
aaacctcaaggtgaacgcgcgaaaccacaaggtgagcatggcagaccgcaaaacaagcct
caaacaccgagcaaaccgaagcagcattacgtcaatccgaatacgacaagtaaaccggca
aaacgcactagtggcacattaagcctcaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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