KEGG   Virgibacillus dokdonensis: A21D_01089
Entry
A21D_01089        CDS       T05261                                 
Symbol
sigW
Name
(GenBank) ECF RNA polymerase sigma factor SigW
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vpn  Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpn03021]
    A21D_01089 (sigW)
Transcription machinery [BR:vpn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A21D_01089 (sigW)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16 HTH_23 HTH_WhiA UPF0122 Herpes_UL92 HTH_20 DUF1492
Other DBs
NCBI-ProteinID: AUJ24201
UniProt: A0A2K9J2G2
Position
complement(1184295..1184858)
AA seq 187 aa
MDEMIKDRIKQVKKGDQSAFEDVVSFFQNRIYQHCFRMLGNAHEAEDIAQEAFIRAYVNI
HSFDDQRKFSTWLYRIATNLTIDRIRKRKPDHYLDAEVKGTEGLNMYSQIADKGRLPEEE
VEGIELKRYIHYEISQLPPKYRSIIMLRYIEEFSLQEISEILDIPLGTVKTRIHRGRETL
RKKLRHV
NT seq 564 nt   +upstreamnt  +downstreamnt
atggatgaaatgattaaagatagaattaaacaagtgaaaaaaggagatcaatccgctttt
gaagatgtggtctcattctttcaaaataggatctaccagcactgttttcgcatgcttggt
aatgcacacgaggcggaagatatagcgcaagaggcttttattcgtgcatatgtcaatatc
cattcttttgatgatcaaaggaaattttcgacgtggttatatcgaattgcaacgaattta
acgatagaccgtattcgtaaacgaaaaccagatcattatctagatgcagaggtaaaagga
acggaagggttgaatatgtattcccagatagccgataagggaagactaccagaagaagaa
gtcgaagggattgagcttaagcgctatattcattacgaaatttcacagcttcctccgaag
tatcgcagtatcataatgttgcggtatattgaagaattttccctccaggaaattagtgaa
atcctggatattccacttgggactgtaaaaacccgtattcatcgtggaagggaaacctta
aggaaaaagcttcgtcacgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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