KEGG   Virgibacillus dokdonensis: A21D_03572
Entry
A21D_03572        CDS       T05261                                 
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
vpn  Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpn03016]
    A21D_03572 (miaB)
Enzymes [BR:vpn01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     A21D_03572 (miaB)
Transfer RNA biogenesis [BR:vpn03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    A21D_03572 (miaB)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2
Other DBs
NCBI-ProteinID: AUJ26606
UniProt: A0A2K9J417
Position
complement(3803434..3805011)
AA seq 525 aa
MNEQQRKQQAQIKETNPTDVKSGMDNMERIKNTSSEDLISKYFKTTYEPPNLNKARKRGR
DKVNVHYDFSIPEDMENIGEGKKFLIRTYGCQMNEHDTEVMAGILTEMGYTSTSETNDAD
IILLNTCAIRENAENKVFGEIGHLKALKREKPDLILGVCGCMSQEETVVNRILKKHQHVD
LIFGTHNIHRLPHLVKEAMFGKEKIVEVWSKEGDVIENLPKARKGKIKAWVNIMYGCDKF
CTYCIVPMTRGKERSRLPEDIIQEVRHLAAQGYKEVTLLGQNVNAYGKDLDGMTYGLGDL
MDELRKIDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEILKKMNRKYT
RESYLELVRKIRAAMPNATLTTDIIVGFPNETEEQFEETMTLMEEVGFEAAYTFIYSPRE
GTPAARKKDNVPEEVKKQRLYRLNELVNKQSAASMKTYQNQVVKVLVEGESKKDPEVLAG
YTERNKLVNFKGPKAAIGQIVDVKITEAKTWSLDGVMIENTVGVK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaacgagcaacaacgtaagcaacaagcacaaattaaggaaacaaatccaacggacgta
aaatccggtatggataatatggagcgtattaaaaatacttctagtgaagatttgatttcc
aagtatttcaaaacaacttatgaaccaccgaatttaaataaagcacgtaaacgtggaaga
gataaagtgaatgtccattacgatttttctattcccgaagacatggaaaatattggggaa
ggaaagaagtttttaattcgtacatatggctgccaaatgaatgagcatgatacggaagta
atggctggaattcttaccgaaatgggttatacatctacttctgaaacaaatgatgctgat
attattttgttgaatacttgtgcaattagagaaaatgctgagaataaagtatttggtgaa
attggacatttaaaagcgttaaaacgagaaaagccagatttgatccttggtgtttgtggt
tgcatgtctcaagaagaaactgtggtgaatcggatattgaagaaacaccagcatgttgat
ttgatttttggtactcataatatacatcggttaccacatcttgtgaaagaagcaatgttt
ggtaaagaaaaaatcgttgaagtgtggtctaaagaaggtgatgtcattgaaaaccttcca
aaagcacgaaaaggaaaaataaaagcatgggttaacattatgtacggttgcgataagttc
tgcacgtattgtattgtaccaatgacccgtggaaaagagcgaagtcgtcttccggaagat
atcatccaagaagttcggcatttagctgctcaaggttataaagaggtaaccttattaggg
caaaacgtaaatgcttatggaaaagatttagacggcatgacatacggtttaggtgattta
atggatgaacttcgcaaaattgatatcccaagaattcgctttacgacatcacaccctaga
gattttgatgatcgcttaattgaagtattggcaaaaggggggaatttgttagatcatatt
catttgccagtccagtcaggcagtagtgaaattttgaagaaaatgaatcggaaatatacg
agagaatcgtatttagaactcgttaggaaaattcgcgcagcgatgccgaacgcaacgtta
acgacagatattattgttggatttccaaacgaaacggaagagcagtttgaagaaacgatg
accttaatggaagaagttggttttgaagcagcttacacctttatttattcaccacgtgaa
gggactcctgcagctaggaagaaagataatgttccagaagaggtaaaaaagcaacgacta
tatcgcttaaatgagcttgtcaataagcagtctgctgcgtctatgaaaacgtatcagaat
caagtcgtaaaagtacttgtagagggtgaaagcaaaaaagatccagaagttctagcgggg
tatacggaaagaaataaactcgttaactttaaaggaccaaaggctgcaattgggcagatt
gtagacgtgaaaattacagaagctaaaacatggtctttagatggtgttatgattgaaaat
acagtaggggtgaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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