KEGG   Virgibacillus dokdonensis: A21D_03661
Entry
A21D_03661        CDS       T05261                                 
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn00020  Citrate cycle (TCA cycle)
vpn00640  Propanoate metabolism
vpn00660  C5-Branched dibasic acid metabolism
vpn01100  Metabolic pathways
vpn01110  Biosynthesis of secondary metabolites
vpn01120  Microbial metabolism in diverse environments
vpn01200  Carbon metabolism
Module
vpn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vpn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    A21D_03661 (sucD)
   00640 Propanoate metabolism
    A21D_03661 (sucD)
   00660 C5-Branched dibasic acid metabolism
    A21D_03661 (sucD)
Enzymes [BR:vpn01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     A21D_03661 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-ProteinID: AUJ26695
UniProt: A0A2K9J4R7
Position
complement(3897460..3898362)
AA seq 300 aa
MSVYVNKDTKVIVQGITGGTAKFHTKQMLEYGTKIVGGVTPKKGGTEVEGVPVFNTVLEA
VEATGATASVIYVPAPFAADAILEAVDAELDLVICITEHIPVMDMVKVKRYMEGKNTRLV
GPNCPGVITADESKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSEAGYGQTTAVGIGG
DPVNGTNFIDVLEAFNNDPETYAVMMIGEIGGTAEEEAAEWVKANMKKPVVGFIGGATAP
PGKRMGHAGAIISGGKGTAEEKIRIMNECGIKVAETPAVMGETMIGVLEEKGLKEKCKTQ
NT seq 903 nt   +upstreamnt  +downstreamnt
atgagtgtatacgttaataaagatacaaaagtaattgtccaagggataaccggtggcaca
gctaaatttcatacgaaacaaatgcttgaatacggcacaaaaattgttggtggagtcact
ccgaaaaaaggtggtacagaggtagaaggtgtacctgtttttaatacagtattagaggct
gtagaagcaacaggtgctacagcttccgtcatctatgtaccggccccgtttgctgcagat
gctattctagaagctgttgacgctgaattagatttggttatttgtataacggagcatatt
ccggtaatggatatggtgaaagtaaaacgttatatggaaggaaagaatacacggctcgta
ggaccaaactgtccaggggttattactgctgatgaaagtaaaattggaattatgcctggc
tatattcataaaaaaggtcatattggcgttgtctctcgttcaggaacattaacatatgaa
gcggttcatcaattatcagaagctggatatggtcaaactaccgctgttggtatcggtggt
gatcctgttaatggaaccaatttcattgacgtgctagaagcatttaataatgatccagaa
acgtatgctgttatgatgattggagagataggcggtacagcagaagaagaagcagctgaa
tgggtgaaagcaaacatgaagaagcccgtagttggttttattggaggtgctacagctcct
ccaggaaaaagaatggggcatgctggcgctattatttcaggtggaaaaggaacagccgag
gaaaaaattcgcattatgaatgagtgtggaattaaagttgctgaaacgccagcagttatg
ggtgaaacaatgataggtgtgcttgaagaaaaaggcttaaaagagaagtgtaaaacacaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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