KEGG   Virgibacillus dokdonensis: A21D_03674
Entry
A21D_03674        CDS       T05261                                 
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn02024  Quorum sensing
vpn03060  Protein export
vpn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    A21D_03674 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A21D_03674 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A21D_03674 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpn02044]
    A21D_03674 (ffh)
Enzymes [BR:vpn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     A21D_03674 (ffh)
Secretion system [BR:vpn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   A21D_03674 (ffh)
  Eukaryotic Sec-SRP protein
   A21D_03674 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 AAA_17 AAA_16 6PF2K AAA_30 AAA_33 APS_kinase AAA_31 ResIII AAA_19 Ploopntkinase3 AAA_18
Other DBs
NCBI-ProteinID: AUJ26708
UniProt: A0A2K9J430
Position
complement(3907554..3908900)
AA seq 448 aa
MAFEGLADRLQSTIKKITGKGKVTEQDVKEMTREVRLALLEADVNYKVVKDLIKNIKERA
VGQEVMESLTPGQQVIKVVKEELTDLMGGEQSKIAVADRAPTVIMMVGLQGAGKTTTSGK
LANLLRKQHNRKPLLVACDVYRPAAIQQLETLGQQLDMPVFSMGTDANPVDIAKQAMVKA
KEEHHDYVIIDTAGRLHVDEELMGELQQIKTEVDPHEIYLVVDSMTGQDAVNVAESFNEQ
LDITGVVLTKLDGDTRGGAALSIKAVTDKPIKFAGMGEKLDELEAFHPDRMASRILGMGD
VLSLIEKAQTNVDEKQAKELEQKMRTMSFTLDDFLEQMGQVKNMGPLEDLMNMIPGANKM
KGLKNAQFDEKQLSHVEAIIQSMTKKERQDPSIMNASRKKRVAKGSGTNVSQVNRLLKQF
EEMKKMMKQMTNMQKGKKGKKGMKLPFM
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcatttgaaggattagctgaccgcctgcaaagtaccataaagaaaataacgggtaag
ggtaaggtaactgaacaagacgtaaaagaaatgacaagagaagttcgtttagctttgcta
gaagcagacgttaactataaagtcgttaaagatttgattaaaaatattaaagaacgtgct
gttggtcaagaagtaatggaaagtttgacacctggccaacaggttattaaagttgtcaaa
gaagaattaacggatttaatgggtggagaacagagtaaaattgctgtagctgatcgtgct
cctactgtcattatgatggtagggttacaaggtgctgggaagacaaccacctctggaaaa
ttagcaaacctcttacgaaaacaacataatcgcaaaccattactcgttgcttgtgatgtt
tatcgtccggctgcgattcaacaattggaaacattaggacaacaacttgacatgcctgta
ttttcaatggggacagatgcaaatcctgtagatattgcaaaacaggcgatggtaaaagcc
aaagaagagcatcatgattatgtcattattgatactgctggacgattgcatgtagacgaa
gaacttatgggagaattacaacaaattaaaaccgaagtcgatccacatgaaatctatctt
gtagttgattccatgaccggtcaggatgctgtgaacgttgcagaaagcttcaatgaacag
cttgatataacaggtgttgtgttaaccaaattggatggtgacactcgtggtggagccgct
ctatctattaaagctgttactgacaaaccgattaaatttgctggtatgggagagaaactt
gatgaattagaagcatttcaccctgatcgcatggcgtctaggattttaggtatgggagac
gtgctatctttaatcgaaaaagctcaaacgaatgtagatgagaagcaagcgaaagaactg
gaacagaaaatgcgcacgatgtcttttacattggatgactttttagagcaaatgggtcaa
gtgaaaaatatgggtccattagaagacctaatgaatatgattccaggtgcaaataaaatg
aagggtttaaaaaatgcccaatttgatgaaaaacaactctcacatgtagaagcgattatt
caatctatgaccaagaaggaacgtcaagacccaagcattatgaatgcaagtagaaaaaaa
cgggtagctaaaggttcaggtacaaatgtttcacaagtaaatcgcttgctgaagcaattt
gaagaaatgaaaaaaatgatgaagcaaatgacaaatatgcaaaaaggcaaaaaaggcaaa
aaaggaatgaagctgccgtttatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (29)   

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