KEGG   Vanderwaltozyma polyspora: Kpol_1053p12
Entry
Kpol_1053p12      CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03013  Nucleocytoplasmic transport
vpo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Kpol_1053p12
   03015 mRNA surveillance pathway
    Kpol_1053p12
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1053p12
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     Kpol_1053p12
   mRNA cycle factors
    P-body specific factors
     Kpol_1053p12
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 5544406
NCBI-ProteinID: XP_001644134
UniProt: A7TN58
AA seq 399 aa
MSETKPLEKKNKKTGNRYFRRGKKGSGKNKDGIEGKTGASKPGKDGSNGGTVASNNPMAN
KDKVNNKSDKSKRRRRRNKKKNVGKNGDEEISGHKLVLRLLPPNLTEEKFWEIVTPALDK
LENYEIESSYFVQGEYTNKPFQDPSYSRCYIIFKKFDKLKEAAQKLATVNFMDDKIDSAI
ARIRISPYNKSISVIPPNRPSRRSIEGTVESDSLFKTFIQSLQIMEEEKNHYEYSEVSLF
KSLKKELSKRNELANVMNKRREQALIELAGADNKKDGSKKKKKKKKNKKKKSEKIKESED
TNVNKGPSNVKNKKIRKNKQKGSNSQKENHNNSIEKNNNIVILEAAGKKELQRRKKLQKK
NEMELSLNKLASLPSKNVEASSETNKQPSKMKILKRPEN
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtctgaaactaagccgttagagaagaagaataagaagactggtaaccgttactttcgt
cgtgggaagaaaggatcaggtaagaataaagatggaatagaaggtaaaactggtgctagt
aaaccaggtaaagatgggtccaatggtggtactgtagctagtaacaatccgatggctaac
aaggacaaggtgaataataagtctgataaatcaaagagaagaagaagaaggaacaaaaag
aagaacgttggtaaaaatggcgatgaagagattagtggccataaacttgtgttaagacta
ttgcctccaaatctaaccgaagagaagttttgggagattgttactccagctttggataaa
ttagaaaactatgaaattgagagttcttattttgtacaaggtgagtatacaaataagccc
ttccaagatccaagttattcacgttgttatataatctttaaaaaatttgataaactaaaa
gaagctgctcagaaattagctactgtgaatttcatggatgataagatcgattcagctatc
gctagaattaggatttctccatacaacaaaagcattagtgtcattccaccaaaccgtcct
agtagaagaagtattgaaggcactgttgaaagtgattccttatttaaaacttttattcaa
tcattacagataatggaggaagagaaaaaccattatgaatattcagaagttagtttattc
aagtcattgaaaaaagaattgagtaaacgaaatgaattggcaaatgtaatgaataagagg
agagaacaggcattaattgagcttgcaggagcagataataaaaaagatggttcaaaaaag
aagaagaagaaaaagaagaataagaagaagaaatctgagaaaataaaagaatctgaagac
actaatgtcaataaaggtccttcaaatgtaaaaaataagaagattagaaagaacaagcaa
aagggatctaattctcaaaaggaaaaccataataattcgattgaaaaaaataataacata
gtaatattagaggcagctggtaagaaagaactacaaagacgaaaaaaattacaaaaaaag
aatgaaatggaattatctttaaacaaattagcttcattaccatctaaaaatgttgaagct
tcttctgaaacaaataagcaaccatcaaaaatgaaaatacttaagagacctgaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system