KEGG   Veillonella parvula: Vpar_0710
Entry
Vpar_0710         CDS       T01130                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
vpr  Veillonella parvula
Pathway
vpr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vpr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Vpar_0710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpr03400]
    Vpar_0710
DNA repair and recombination proteins [BR:vpr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Vpar_0710
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ACZ24393
Position
851139..852965
AA seq 608 aa
MPSEELLEKVSHLPTTPGVYLWRDQYNRIIYVGKAINLRNRVRSYVRNDANRAPKVTAMM
KRAVDVEVIQTKTEMEALILENTLIKEHEPKYNIRLRDDKTYPYVKISVQEDYPRVYMTR
RLERDGAKYFGPFTDVTSVHVVLKLIRQYYPLRTCKSMKVERPCLQYHMHYCEAPCFNKI
SVPDYRKYIDEIIELFEGKPIPLLKEIKSKMEAAAEDLRFEDAARYRDQLSSIEKIQEKQ
RMVTQRGDLDVLGLAVDTSMACVQLLFIRGGRLLGRENYFVQHDGDSSETIMTDFIKQYY
GDTNFIPKELLLPMESTDRDLLTEWFTQLKGQHVDVSVPQRGYKMDMIKMAHENAETFLE
ERRRQWQHQIDKTGGAVKKLAEILDLPRLPERMECFDISHTQGAETVASMVVFEGGKPAK
KEYRRFKLKTTQGKPDDFKSMAEIMERRYGNETDWPMPDLIIIDGGKGQLNAALPLIRAV
GVTDVPVISLAKRIEEVFVEGQSESIILSHHTPELQLLQQIRDEAHRFAITYHRKLRGKR
NLESILDHIEGIGPKRRKALWAHFNSLEAMKEASIDELANVESMNYKTAETLYNFFRMSK
VEKQEALK
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgccgtctgaagaattactggaaaaggttagtcatttgccaactacaccaggcgtatat
ttgtggcgtgatcaatataaccgaattatttatgtaggtaaggctattaacttgcgaaat
cgtgtgcgttcctatgtgcgtaacgatgcaaatcgcgcaccaaaggttacggccatgatg
aaacgagccgtcgatgtggaagttattcaaacaaaaacggagatggaagcgctcatcttg
gagaatacacttatcaaggagcatgaaccgaaatataatattaggcttcgtgatgataag
acgtatccctatgttaaaatatcagtgcaagaggattacccacgcgtatatatgacgcgt
cgcctagagcgtgatggagccaagtactttggcccttttacagatgtcacatctgttcat
gtggtactgaaattaatacgacagtactatccattgcgtacctgtaagtctatgaaggta
gaacgcccatgcttgcagtatcatatgcattactgcgaggcaccgtgttttaacaaaata
tctgtaccggattatcgaaagtatattgacgaaatcatagaactttttgaaggtaaacct
ataccattgctaaaggaaattaaatcaaagatggaggctgctgcagaagatttgcgcttt
gaagatgctgcacgttatcgtgatcaattgtctagcattgaaaagatacaagaaaagcaa
cgcatggttactcaacgtggcgacttagacgtcttaggattggctgtagatacatcgatg
gcctgtgtacagttgctattcatccgcggtggtcgtctgttaggccgtgagaattacttt
gtgcaacatgatggagatagttcagaaaccattatgacagactttatcaagcaatactat
ggagatacaaactttattcctaaagagttgttactacctatggagagtacagatagagac
ttattaacagaatggtttacacagctcaaaggccaacatgtagatgtatctgtgccacaa
cgtggctataagatggatatgattaagatggctcatgaaaatgcagaaactttccttgaa
gaacgtcgtcgtcagtggcagcaccaaatcgataagactggcggggcggttaagaagcta
gccgagatcctcgacttgccacgtttacctgaacgtatggagtgctttgacatatctcat
acacaaggggctgaaacggtagcttccatggttgtttttgaaggtggtaagccagcaaaa
aaggaatatcgccgctttaaactgaaaaccacacaaggtaaacctgatgactttaaatcg
atggctgaaattatggaacgtcgttacggtaatgaaacagactggcctatgccagatctt
attatcatcgatggtggtaaaggtcagctcaatgcggctttgccgttaatccgtgctgtt
ggtgttacagatgtgccagttatctccttggctaagcgtattgaagaggtctttgtagag
ggacaatctgaaagtatcattttgagtcatcatacgccggagcttcaattacttcaacaa
attcgtgatgaagcgcatcgctttgccattacctatcaccgtaagttgcgcggtaagcga
aatcttgaatctattcttgaccatattgaaggaatcgggcctaaacgccgtaaggcctta
tgggctcactttaatagtttagaggccatgaaagaggcatctattgatgaacttgcaaat
gtagaatctatgaattataagacggcagaaacgctatataattttttccgtatgtccaaa
gtagagaaacaagaagctttaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (76)   

Download RDF
DBGET integrated database retrieval system