KEGG   Veillonella parvula: Vpar_0968
Entry
Vpar_0968         CDS       T01130                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
vpr  Veillonella parvula
Brite
KEGG Orthology (KO) [BR:vpr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpr03032]
    Vpar_0968
   03400 DNA repair and recombination proteins [BR:vpr03400]
    Vpar_0968
Enzymes [BR:vpr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Vpar_0968
DNA replication proteins [BR:vpr03032]
 Prokaryotic type
  DNA Topoisomerases
   Vpar_0968
DNA repair and recombination proteins [BR:vpr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Vpar_0968
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim SepF
Other DBs
NCBI-ProteinID: ACZ24649
Position
complement(1114815..1117190)
AA seq 791 aa
MSIKRSIVIGEPKAASTSKDTKKKNTKKESTTIKRKVAKESLTPMGIVRDKSVLQTSVPP
EQREPRVYNPDGKVLVIVESPAKSKTIEKFLGPNYVVKASMGHLRDLPKSQIGIDIEHDF
TPRYSNLVTRKKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRITF
NEITKNAVAEALDSPRTIDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSV
AVRLICEREREIQAFVPQEYWTIEGNFETPKKEAFIAELTHIKGEKIDITTESDAQAIVD
AIGNEDAVVTNIEKRKRSRKAVPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGS
YGHVGLITYMRTDSTRISKEMQAMAKDFILRNYGEDYYPSKPNVYGSKGSAQDAHEAIRP
TSLELTPKMVEPFLSRDELKLYTLIWNRFMASQMAPQQNESTTIELNVKNDYTFKATGSR
VIFPGFSAVYEDAKKEDVPQLPALKKNYAAHTVEVLPEQHFTQPPPRYSEASLIKTLEEL
GIGRPSTYAPILDTIVSRNYVENTNKQFVPTELGFVVVDFLITYFEKIINTGFTRDLEEE
LDAIASGKDTYVKVLSDFYEVFAQELEDASDVDRIEIASMESDEICELCNSPMVYKFGRY
GKFLACSNFPECKNTKPITVGTGVTCPKCKEGEIVERKSRRGRIFYGCNRYPQCDFTLWD
KPTHDFCETCGSIMVEKTYKNGTVKKFCSNETCPTRPPKKTRKKKSEASEEPVKESKKSS
KAKKEETTIES
NT seq 2376 nt   +upstreamnt  +downstreamnt
ttgtccattaaacgatctatcgttattggcgagccgaaagcagctagtactagtaaagac
acaaaaaagaaaaatactaagaaagaaagtactacgataaagcgtaaggtagctaaagaa
tccttaacgcctatggggattgtacgggataaatccgtactacaaacttcagtgccaccg
gagcaacgggaaccacgtgtatataatcctgatggcaaagttttggttatcgtagagtct
cctgctaaatctaaaacaattgaaaaattcttaggtcctaactacgttgtaaaggcgagt
atgggccacttacgagatttgccaaagtctcaaataggcatcgatatagagcatgatttc
acgccgcgctatagtaatttggtaacacgtaaaaaggttattgatgaactagtttcttat
gctgatgaaagtagtgccgtattactcgcaactgaccctgaccgtgaaggggaagctatt
tcttggcatttagcgtacattctaaatgtagatcctacgtctacatgccgtattacgttc
aatgaaatcactaaaaatgctgtagcagaggctttggattctccacgtactatcgatatg
aacatggtagatgcccaacaagcacgccgtgtattagaccgtatcgtaggttataaattg
agtcctttgttatggaaaaaggtttgcaaaggccttagtgcaggtcgtgtgcaatccgtt
gcagttcgccttatctgtgaaagagagcgcgaaattcaagctttcgtaccacaagaatat
tggactattgaaggcaattttgaaacgcctaaaaaagaggctttcatagcggaattaacc
catattaaaggtgaaaaaatcgatattactactgaaagtgatgcacaagccatagttgat
gctattggcaatgaagatgcagtagtgactaatattgaaaagcgcaagcgttctcgtaaa
gcggtacctccatttacaacatctaccttgcaacaagatggtgtgcgtaaattgaacttt
ggtgctaagcgtacgatgatgattgctcaacatttatatgaaggtttagaaattggctcc
tatggccacgtaggtttgattacatatatgcgtacagactctacgcgtatctctaaagag
atgcaagccatggctaaggactttattcttcgcaattatggggaagactattatccgtct
aaaccaaatgtgtacggctctaagggttctgcacaagatgcgcatgaggcgattcgtcct
acatctctcgagttaacacctaaaatggtggaaccattcttgagtcgtgatgagcttaaa
ctatacacgttgatttggaatcgttttatggcgagccaaatggcaccgcaacaaaatgaa
tctacaacgatagagttgaatgttaaaaatgactacacatttaaagctactggatctcgt
gttatcttccctggtttcagtgccgtttatgaagatgcgaaaaaagaggatgtacctcag
ttgccagctcttaaaaagaattatgctgcccatacggtagaggtattgcctgaacaacat
ttcacacaaccacctccacgttactccgaggcgagtcttatcaagacattagaagaactc
ggcattggtcgccctagtacatacgcaccaattctagatactatcgtaagccgtaactat
gtggaaaatacgaataaacaattcgtgcctacagagctaggctttgtggtggtagatttc
ttgattacatactttgaaaaaatcatcaatactggctttacccgtgatctagaagaagaa
ctagatgctattgcgtctggcaaggatacgtatgtaaaagtattatctgatttctacgag
gtctttgcgcaagagctagaagatgcaagtgacgtagaccgcattgaaattgcatctatg
gaaagtgatgaaatctgtgaactttgcaatagcccaatggtatataaatttggtcgctat
ggtaagttcttagcatgttctaacttcccggaatgtaaaaatactaaacctattacagta
ggaactggtgtaacatgtcctaaatgtaaagaaggggaaatcgtagaacgtaagtctcgt
cgcggacgcattttctatggctgtaatcgatacccacaatgcgattttacactatgggat
aagccaactcatgatttctgtgaaacatgtggttctataatggttgaaaagacatataaa
aatggtacagttaaaaagttctgttccaatgaaacttgtccgactcgaccaccaaagaaa
acaagaaagaaaaagagcgaagctagtgaagaacctgtaaaagaatctaaaaagtctagt
aaagctaaaaaagaggaaactacaattgaatcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system