KEGG   Vibrio qinghaiensis: CCZ37_08055
Entry
CCZ37_08055       CDS       T05259                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vqi  Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:vqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vqi03032]
    CCZ37_08055
   03036 Chromosome and associated proteins [BR:vqi03036]
    CCZ37_08055
   03400 DNA repair and recombination proteins [BR:vqi03400]
    CCZ37_08055
DNA replication proteins [BR:vqi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CCZ37_08055
Chromosome and associated proteins [BR:vqi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CCZ37_08055
DNA repair and recombination proteins [BR:vqi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CCZ37_08055
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C Arteri_nsp7a GTP_EFTU_D2 HU-CCDC81_euk_1 VWA_2 Nup214_FG HU-DNA_bdg
Other DBs
NCBI-ProteinID: ASU22551
UniProt: A0A223MYB1
Position
1:complement(1764081..1764353)
AA seq 90 aa
MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaacacaattagtagaacaaatcgcagaaaacgctgacatctctaaagcatcg
gcaggccgtgctttggatgcatttatcgaagcggtgagtggcactcttcaatctggcgat
caagtggcgcttgttggctttggtacatttagcgttcgcactcgtgcagcgcgcacgggt
cgtaaccctaaaacgggtgaagagatccaaatcgcagaagcaaaagtacctgctttcaaa
gcaggcaaagcgcttaaagacgcttgcaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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