KEGG   Vigna radiata (mung bean): 106764297
Entry
106764297         CDS       T04126                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03020  RNA polymerase
vra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106764297
  09124 Replication and repair
   03420 Nucleotide excision repair
    106764297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vra03021]
    106764297
   03019 Messenger RNA biogenesis [BR:vra03019]
    106764297
   03400 DNA repair and recombination proteins [BR:vra03400]
    106764297
Transcription machinery [BR:vra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106764297
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106764297
DNA repair and recombination proteins [BR:vra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106764297
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 106764297
NCBI-ProteinID: XP_014504056
UniProt: A0A1S3UDE3
Position
6:complement(519459..522249)
AA seq 176 aa
MFFHIVLERNMLLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEIVEAVVTMVNKMGFFGEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtgctggagcgaaatatgctgctgcatccacgatactttggtcgt
aaccttcgtgataatcttgtttccaaattaatgaaagacgtggaaggcacttgcagtggt
cgacatggatttgtggtggcagttacagggattgaaaacgtagggaaagggttaattcgt
gatgggacagggtttgtgacatttcctgttaagtaccagtgtgttgtcttcagaccattt
aagggggagatcgtagaagctgttgttaccatggtgaacaagatgggattttttggggaa
gctggacctgtccaaatctttgtttcaaaccacttgattccggatgatatggagttccag
tctggagacatgccaaattacactacttcagatggatcagttaagattcaaaaggacagt
gaagtgagactaaagataatagggactcgagttgatgctactgaaattttctgcataggt
accataaaagatgactttctgggtgtgatcaacgatcctacaacagtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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