KEGG   Vigna radiata (mung bean): 106775719
Entry
106775719         CDS       T04126                                 
Name
(RefSeq) transcription initiation factor IIF subunit alpha
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106775719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vra03021]
    106775719
Transcription machinery [BR:vra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     106775719
SSDB
Motif
Pfam: TFIIF_alpha zf-C3HC4_3
Other DBs
NCBI-GeneID: 106775719
NCBI-ProteinID: XP_014518360
UniProt: A0A1S3VJA0
Position
10:14968339..14974742
AA seq 539 aa
MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRSKCVDCGVTLTRLIREYN
VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLHGRQITDTLREKYKNKPWLL
EDETGQSQYHGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKVANNGAAAFGEHGKFEDKESNTGGGRSRKKTGEDDEGHVSDKGE
EDEDEESERKSRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREELAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDE
DDDDDDMDDEVGNPPVIATKQKDAPKEEPVDISPSKPAATGPARGTPSSKSSKGKRKSNE
EVKPANTATPKKVKQENEPKSSTKDVNGSASKSSAPPKGTPPSSSKPGSSGTATGPVSEE
EIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVILRDK
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgtcgacggacctgcaattgaaatcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgagttgcggcaaaaccatggccgag
aatcgctccaaatgcgtcgattgtggtgtcacccttactcgcctgattcgagaatacaat
gttcgtgcaagttctaccaatgacaagaactactttattggaaggttcatgaccggttta
ccagatttttcgaagaagaaaagtgctgagaacaagtgggctctgcagaaggaaggactg
cacggtcgccaaataactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggacgaaacaggtcagtcccagtaccatggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaagaaaggaaggaatttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcagagatggatgatgaaagtagcaaataat
ggcgcagctgcatttggtgaacatggaaaatttgaggacaaggaaagcaacacaggtgga
gggagaagccgtaaaaaaactggtgaggatgatgaaggtcatgtttctgataagggagag
gaggatgaagacgaggaatccgaaaggaagagtagacttggacttaataaaagagccggt
gatgatgatgaagaaggtccaaggggaggggaccatgatctagatgatgatgatgttgag
aagggtgatgactgggagcatgaagaaatattcactgatgatgatgaagctgttggaaat
gaccctgaggaaagggaggagttggctcctgaagttcctgctcctcctgaaataaaacag
gatgaagaggaggaggatgaagataatgaagaagggggaggtctgagtaaatctgggaaa
gagctgaagaagctgcttgggaaagctagtggcctgaatgaatctgacgcagaggatgaa
gatgatgatgatgatgatatggatgacgaggttggcaatcctcctgtgattgctacgaag
cagaaggatgcccctaaggaagaacctgttgacattagcccttcaaagccagcagcaaca
ggacctgctcgtggaacaccatcttcgaagtcttcaaagggaaagagaaaatcaaatgaa
gaagtaaaaccagcaaatactgcaacaccaaaaaaggtgaaacaggaaaatgaaccaaaa
tcgtctaccaaagatgtaaatgggtctgcatctaaaagcagtgcacctcccaaaggtaca
cctccatcatcatcaaagcctgggtcttccggaacagctactggacctgtgagtgaggaa
gaaattagggctgttttaaggcagaagactccagtgaccactcaggatcttgtagctaaa
tttaaggcaagattgagatcttcagaggataagcaagcatttgctgagatcctgaagaga
atctctaaaatacagaagactgcaaatggatccagttatgttatcctgagagataagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system