KEGG   Veillonella rodentium: 44547418_00004
Entry
44547418_00004    CDS       T05216                                 
Symbol
recF
Name
(GenBank) DNA replication and repair protein recF
  KO
K03629  DNA replication and repair protein RecF
Organism
vrm  Veillonella rodentium
Pathway
vrm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    44547418_00004 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vrm03400]
    44547418_00004 (recF)
DNA repair and recombination proteins [BR:vrm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     44547418_00004 (recF)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_27 AAA_21 AAA_29 ATPase_2 ABC_tran NB-ARC
Other DBs
NCBI-ProteinID: SNV52077
UniProt: A0A239XZM5
Position
1:3030..4130
AA seq 366 aa
MRIDSLQLFQFRNYKDIQIQFNPEIIVLYGTNGAGKTNILESIYVGTIGKSHRTNDTSDM
LLFNADEAGLVVKFEKKDTPQKVNIKLFRQGAKDIRLNDTKISQKELIGTLNTVIFCPED
LQLIKGSPSGRRRFLDMEISQTSATYYHQIIQYNRLLQQRNALLKEYRGKQSIPLDEWDL
QLADMASFIVKKRLESLKKINLLIDLMNRKLTGGLENLTISYEQSYIEDGSLEYTKEGFY
ERIKAALPLDRHRLTTSVGPHRDDLRFFSDGMDLKKFGSQGQQRTAVLSLKLSELEFIKS
EVGEYPVLLLDDVLSELDESRRANLLQFIHKRIQTFITTTDIHDFQDLKSVQFIHCEGGQ
IQYGKP
NT seq 1101 nt   +upstreamnt  +downstreamnt
gtgagaattgactcactgcaattattccagtttcgcaactacaaggatattcagattcag
ttcaacccggaaatcatcgtcctgtacggtacaaacggggcggggaagacgaatatcctc
gagtccatatatgtaggaactatcggcaagagccatcgcacgaacgatacatcggatatg
ttattattcaacgcggatgaagcaggtctcgtcgtgaagttcgagaaaaaggatacgcct
cagaaggtaaatatcaagttgttccgtcaaggggcgaaggatatcagattgaatgatacg
aagatttctcaaaaggaactcatcggtacattgaatacggttatcttctgtccggaggac
ttacagctcatcaagggcagcccctctgggcgtcgtcgatttcttgatatggaaatctcc
cagacaagcgctacctattatcatcagatcatacaatataaccggttgttgcagcaacgc
aatgcgctgttaaaagaataccgcggtaagcagagcatacctctcgatgaatgggattta
cagctggcggatatggcgagttttatcgtaaaaaaacgccttgaaagtctaaagaaaatc
aatcttctcatcgatctgatgaatcgtaagctcacgggaggtcttgaaaatctcaccatc
agctatgaacagtcatatattgaggacggttctttggaatatacgaaggaaggcttttac
gagcgaatcaaggcggctttgccgctggatcgtcatcgacttacgaccagtgttggtcct
catcgcgatgatttgagatttttctcggacggcatggatctaaaaaaattcggatctcag
ggacagcagcgaacggccgttttgtcgctcaagttgagtgaactggaattcatcaaatcc
gaggtgggtgaatatccggtacttttattggacgatgtcctgagtgaattggacgagtcg
agacgggcgaatttattgcagtttattcacaaacgaattcaaacatttattactacgacg
gatattcatgattttcaggatttaaaatccgttcaatttattcattgtgaagggggacag
attcagtatggaaagccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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