KEGG   Veillonella rodentium: 44547418_01734
Entry
44547418_01734    CDS       T05216                                 
Symbol
rluD_3
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
vrm  Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vrm03009]
    44547418_01734 (rluD_3)
Enzymes [BR:vrm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     44547418_01734 (rluD_3)
Ribosome biogenesis [BR:vrm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    44547418_01734 (rluD_3)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: SNV74608
UniProt: A0A239ZV19
Position
1:complement(1847318..1848184)
AA seq 288 aa
MSWKTYTVKEPTKLTVSKYVKEHFSLSSRDIQMLFRKKRVKVNGRVAHSQRLLKKGDVLT
LELPQDRDYGVETENGPLTVLFEDEHTLVVDKPPFMLVHPAGQTKSSTLSNYVAGYYAKK
GVVHKMRPVHRLDRDTSGCILFGKTKTAQQYYADELKAGRIDRIYTGLVEGQIDTSGIVD
APIGVDPVFDNRRIIDEFGQPAQTEYTVLGYEENHTLLRFKLFTGRTHQIRVHMAYMGHP
IVGDAMYGTRTKPYTRQCLHATELTFVPYGRNEAVTIFSDVPENFGRE
NT seq 867 nt   +upstreamnt  +downstreamnt
atgagttggaaaacctatacggtaaaagaaccgacgaaactgaccgtatctaaatatgta
aaagagcacttttctctatcgtcccgcgatattcagatgctgtttcgcaagaaacgggtg
aaagttaacggtcgtgtggctcattcgcagcgtttgttgaaaaagggcgatgtccttacg
cttgaactgccgcaggacagggattacggtgtagagacagaaaacggtcctctcactgta
ctctttgaggatgagcatactcttgtagtcgataagcctccattcatgttggtccatccg
gcgggacagacaaagtcctccacattgagcaattatgtggcgggatattatgctaaaaaa
ggtgtggttcataagatgcggcccgttcatcgccttgatcgtgatacatcgggatgtatt
ctgttcggcaagacgaagacagctcagcaatattatgctgatgaactgaaagcaggacgt
attgaccgtatatatacgggtcttgtggaggggcaaattgatacatccggtattgtggat
gcgcccataggtgtagaccctgtatttgataatcgccgtattatcgatgaattcgggcag
cctgctcaaacggaatatactgtattgggttatgaagaaaatcataccttgttgcgattt
aaattgttcaccgggcgaacccatcagattcgcgttcatatggcttatatggggcatccc
atcgtgggggatgctatgtatggcactcgtactaaaccttatacgagacaatgtttacat
gcaacggaattaacgtttgtgccgtatggcaggaatgaggcggtaacgattttcagtgat
gtgcctgagaacttcggacgtgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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