KEGG   Aliivibrio salmonicida: VSAL_I2531
Entry
VSAL_I2531        CDS       T00782                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-E factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vsa  Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:vsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vsa03021]
    VSAL_I2531 (rpoE)
Transcription machinery [BR:vsa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VSAL_I2531 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: CAQ80215
UniProt: B6EKN5
Position
1:complement(2713011..2713589)
AA seq 192 aa
MSEQLTDQVLIERVQRGDKQAFNHLVIKYQNKVCNLVARYVKNSGDVPDVAQEAFIKAYR
ALPTFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPAFDVDAEDAEYYEGASALKEITNPE
NLSLSEELRQIVFSTIDALPEDLKTAITLRELEGLSYEDIAAIMECPVGTVRSRIFRARE
VVEKKIQPLMQR
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagtgagcagttaaccgatcaggtattgattgagcgagttcaaagaggcgacaagcaa
gcttttaatcatttggtgattaagtaccaaaataaagtctgtaatcttgtcgctcgttac
gtaaaaaatagtggtgatgttcctgatgtagctcaagaagcgttcattaaggcctaccga
gcgttaccaacgttccgaggtgatagtgcgttttatacttggctttatcggatagcggtc
aatacagcaaaaaattatttagttgctcagggaagaaggcctccagcatttgatgttgat
gccgaagatgccgaatattatgaaggggcgagtgcattaaaagaaattacgaaccctgag
aatttatcgttgtctgaagagttacgacaaattgtattttcgacgatcgatgcgttacct
gaagatttaaaaacagcaataacattacgagagctagaagggctaagttatgaagatatt
gctgcgataatggagtgtccggttggtacggttcgttctcgtattttccgagctcgtgaa
gtcgtcgagaagaaaattcaaccgctaatgcagcgttaa

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