KEGG   Aliivibrio salmonicida: VSAL_II0569
Entry
VSAL_II0569       CDS       T00782                                 
Name
(GenBank) putative RNA pseudouridylate synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vsa  Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:vsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vsa03009]
    VSAL_II0569
   03016 Transfer RNA biogenesis [BR:vsa03016]
    VSAL_II0569
Enzymes [BR:vsa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     VSAL_II0569
    5.4.99.29  23S rRNA pseudouridine746 synthase
     VSAL_II0569
Ribosome biogenesis [BR:vsa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VSAL_II0569
Transfer RNA biogenesis [BR:vsa03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    VSAL_II0569
SSDB
Motif
Pfam: PseudoU_synth_2 Wbp11 APG6_N
Other DBs
NCBI-ProteinID: CAQ81323
UniProt: B6ERJ0
Position
2:complement(621662..623347)
AA seq 561 aa
MTQHQFTRFSTSIDQYSLPANFTFPYYYVPHPLALLAMSELQHYLDTQQEWQYDFTAIGH
MFGVLVVKNQQGDIGYLSSYAGNELTNHKIHSDTPSLFVDTIVDHHYDQPYFTEKTQHIN
TLRHHISTLKSTPEFSALTDKLVLKNSQAEQEITAFQQSMAKSKKQRKQLRTEAESNPAS
TVNTAQLEALIHDLGNQSSREKRELKALKEQWKASLAELTIQHNTMLTSIAQKENEYKQL
SKNLDIEKLRACQFTNQLGSTKSLYDLFTAVDDESSPISHSSEENAPKLLQAAFKMGLTP
LALGEFWWGSSPYETIRQHKNVYPACQSKCFEILEHMLEGIELDDNSLKQTPSYGKDLEI
VYEDEAIVIVNKPAEFLSVPGKFITDSVQTRIKARYPQATGPLIVHRLDMSTSGLLVLTL
TAETNKQVQKQFIDRTVEKRYTALLEGNIALNDGIIDLPLTGDLEDRPRQMVDHKQGRKA
ETTFQVIERNNNQTKVYLYPKTGRTHQLRVHCAHQAGLGTPIVGDDLYGFKSNRLHLHAG
YLKFTHPITGNEVEFSVKDDF
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgacacaacatcaatttacccgattctcgacgagcattgatcagtactcattacctgcg
aattttacgttcccatattactatgtccctcacccattagcgttactagcaatgagtgag
ctacagcattacctagacactcaacaagaatggcaatacgactttaccgcgattggacac
atgtttggcgtgcttgtcgttaaaaaccaacaaggagatatcggttatttatcttcttat
gcaggaaacgagttaactaatcataaaatacacagtgacactcctagcctttttgtcgat
acaattgttgaccatcactatgatcagccttactttactgaaaaaacacaacatatcaat
acgcttcgccaccatatatctacattaaaaagcaccccagaatttagtgcccttactgac
aaattggtgttaaaaaattcacaagctgagcaagaaatcactgcatttcaacaatcgatg
gcaaaaagtaagaagcagcgtaaacaattacgaacagaagcagaatcaaaccctgcatca
acagtaaacacagcacaacttgaagcgttaattcacgatcttggtaaccaaagcagccga
gaaaaaagagaattaaaagccttaaaagagcaatggaaagccagccttgcagaattaacg
attcaacataatacgatgcttacttcaattgctcagaaagaaaatgagtacaaacaactg
tctaaaaatctagacatcgaaaagttacgagcttgccaatttacaaaccaattgggctca
acaaaaagcttatatgatttattcactgctgttgatgatgaatcatctccgatttcacac
tcaagtgaagagaatgcacccaaattacttcaagcggcctttaaaatgggactaacccct
ttagcgctcggagagttttggtggggttcttcaccttatgaaacaatcagacaacacaaa
aatgtctatcctgcctgtcagagtaagtgttttgaaatcttagagcacatgcttgaagga
atagaactggatgacaattcattaaaacaaacgccctcttatggaaaagatcttgagatc
gtttatgaagatgaggccattgttatcgtaaacaaaccggctgaatttttatcggttcca
gggaaatttattacagactcagtacagactcgcattaaagcgcgttatccacaggcaaca
ggtccattaatcgtacaccgcttagacatgtcgacgtcaggtctattagtattaacttta
acggctgaaacaaataagcaggtacaaaagcagtttattgatagaacggtagaaaaacgc
tacaccgcgcttcttgagggtaacattgccttaaatgatggcatcatagatttacctctc
actggtgatttagaagacagaccacgacaaatggtagaccataagcaaggccgaaaagca
gaaaccacttttcaagtaatagagcgaaacaacaaccaaacaaaagtctacctttaccca
aaaacaggtcgaactcaccagttgcgcgtacattgtgctcatcaagcgggtttgggcacc
cctattgtcggtgatgacttatatgggtttaaatctaaccgattgcatctacatgctggg
tacctaaaatttacgcaccctatcactggtaacgaggtcgaattttcagtgaaagatgat
ttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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