KEGG   Vibrio mediterranei: BSZ05_12835
Entry
BSZ05_12835       CDS       T04936                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
vsh  Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vsh03032]
    BSZ05_12835
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_12835
Enzymes [BR:vsh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BSZ05_12835
DNA replication proteins [BR:vsh03032]
 Prokaryotic type
  DNA Topoisomerases
   BSZ05_12835
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BSZ05_12835
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Peptidase_M13_N ApbA
Other DBs
NCBI-ProteinID: ASI90596
Position
1:2738689..2741331
AA seq 880 aa
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLNEVIDGCLAYIKNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV
YMRSKAEIEEDKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARDRAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWELGSVA
SMLERAGTDAARPDWLEDQYGIRDGLYYLTEQQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVITEELELVQATYGDERRSEITAAVHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVSEFSPEKFIFMATGDGTVKKTSLD
QFSNVRANGLIAVNLRDDDSLIGVDITDGQSDIMLFSKQGKVVRFSEDKVRAMGRTAAGV
RGMKLADEDQVVSLIVPSNQGDILTVTQNGYGKRTELEEYPTKGRATQGVVSIKVSERNG
PVVGAIQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTASDESVVGLQRIDE
VEELELPEGEEVEANAETQAPESGDLAADDSAADDSATEE
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagctgagaggctct
tatctcgactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggt
ctaaaacctgttcaccgccgcgttttattcgcgatgaatgttctaggtaatgattggaat
aaaccatataaaaagtctgcccgtgtggtcggcgatgtaatcggtaagtatcacccacac
ggtgatagtgcggtatacgacaccatcgttcgtatggcgcagcctttctcacttcgctac
atgttggtcgatggtcaaggtaacttcggctcgattgacggcgactctgcggcggcaatg
cgttataccgaagtccgcatggcgaaaatcgctcatgagttgctagcggatctagacaaa
gagacggttgactacgttcctaactatgatggaacggaacaaattccagccgtactaccg
acaaaaattccaaaccttttggttaatggtgcgtcaggtatcgctgtaggtatggcgaca
aacattccaccacataacttaaacgaagttattgatggctgtttggcatacatcaagaat
gaagacatcacgattgacgagctcatggattacatcccgggcccagatttcccgacagcg
gcactgatcagtggtcgtaaaggcatcatcgatgcttacaagacgggtcgtggtaaggtc
tacatgcgttctaaagcagagatcgaagaagacaagaatggtaaagaaaccatcattgtt
accgagatcccttatcaggtgaacaaagctcgcttaatcgaaaagattgcagagctagtt
aaagataagaaagtagaaggcattagcgcactacgtgatgagtctgataaagacggtatg
cgcattgttatcgaatgtaagcgtgacgcagtaggtgaagtggttctaaacaacctgtac
tcacagactcagctgcaaacgacattcggcatcaacatggttgccctaaacaatggtcag
ccacagctgttcaaccttaaggacatgctgaagtgctttgttgatcaccgccgtgaggtt
gtgactcgccgtactatcttcgaacttcgtaaagcaagagaccgtgctcacattctagag
gcgctatctctagcacttgcgaacatcgatgaagttattgaacttatcaagaacgcacca
acaccagctgaagcaaaagtaggcctggtttctcgtggttgggagctaggtagcgtagct
tctatgctagagcgcgctggtaccgatgcagctcgtccagattggctagaagaccaatac
ggtattcgtgacggtctgtactacctaacggaacaacaagctcaagcgattcttgaactt
cgcctacaccgtttaactggtctagagcatgagaagattcttgacgagtacaaagcactt
ctagaagaaattgcagaactgatgcacattcttgcaagcacagagcgcttgatggaagtg
atcaccgaagaacttgaactagttcaagcaacttatggtgatgagcgtcgtagtgaaatc
acagcggcggttcacgacattgatatggaagagctaatcgctcgtgaagacgtagtagtc
actttgtctcacgaaggttatgtgaagtatcaaatcctaagcgactacgaagcacagcgt
cgtggtggtaaaggtaagagtgcgactaagatgaaggaagaggattacatcgagcgtctg
cttgttgcaaatactcacgacaatatcttgtgcttctctacgcgcggtaagacttaccgt
ctgaaagtgtatcaattgccactcgcaagtcgtactgctcgtggtaagcctatcgttaac
attcttccactagaagaaggtgagcgtattacggcgattcttcctgtaagtgaatttagc
ccagagaaatttatctttatggcgactggtgacggtaccgttaagaagacttctctagac
caattctctaacgttcgtgcaaacggcctaattgctgtaaacctacgtgatgatgattcg
ctaatcggcgttgatatcaccgatggtcaaagtgacatcatgctgttctcgaagcaaggt
aaagtagttcgattcagcgaagacaaagtacgtgccatgggtcgtactgcggcaggtgtc
cgtggtatgaaactggcagatgaagaccaagtggtgtcgttgattgttccttctaaccaa
ggtgacattctaaccgtgacacaaaatggttacggtaagcgtactgagcttgaagaatac
ccaacgaaaggtcgtgcaacacaaggtgttgtatctatcaaagtttctgagcgaaacggt
ccagtcgttggcgcgattcaagttgaagaaggcgacgaaatgatgatgatcactgacgca
gggacgctagttcgtactcgtgttgctgaagtgagtcaagttggtcgtaatactcaaggt
gtcacgcttatccgcaccgcgtctgacgagtcagtcgttggtttgcagcgtattgatgaa
gtcgaagagttagagttaccagagggcgaagaagttgaagcaaatgcagagactcaagcg
ccagaatctggagatttagcggctgacgactcagcggctgacgattctgctactgaagag
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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