KEGG   Vibrio mediterranei: BSZ05_18495
Entry
BSZ05_18495       CDS       T04936                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
vsh  Vibrio mediterranei
Pathway
vsh00260  Glycine, serine and threonine metabolism
vsh01100  Metabolic pathways
Module
vsh_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSZ05_18495
Enzymes [BR:vsh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     BSZ05_18495
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C Lycopene_cycl NAD_binding_8 FAD_binding_2 FAD_binding_3 DAO Pyr_redox_2 GIDA Pyr_redox_3
Other DBs
NCBI-ProteinID: ASI91833
Position
2:complement(389119..390807)
AA seq 562 aa
MEQRYDYIIVGAGSAGCVLADRLTENGVHSVLLLEAGGSDKSIFIQMPTALSYPMNTEKY
AWQFETTEEAGLDGRKLHCPRGKVLGGSSSINGMVYVRGHACDFDQWEQQGAKGWNYQSC
LPYFRRAESWDGGSDEYRGGDGPVGTCNGNNMTRNPLYQAFIDAGKEAGYPETQDYNGYQ
QEGFGPMHMTVDGGVRASTSNAYLKRALKRPNLTLIKGVMVNKVLLEAKQAVGVQYEKSG
IVVDAKVNKEVISSAGSIGSVQLLQLSGIGPKKVLERAGVTVEHDLAGVGANLQDHLEVY
FQYHCSQPITLNSKLGLVSKGLIGAEWILTRKGLGATNHFESCAFIRSRKGLKWPNIQYH
FLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGTVEIRSANPHDKPLIEFNYISTEQDRQD
WRDCIRLTREILNQPAMDAYRGDEIQPGLHIQSDDAIDEWVKQNVESAYHPSCSCKMGAD
NDPLAVLDEQCRVRGIKALRVVDSSIFPTIPNGNLNGPTIMVAERAADIILGKPLQQDKQ
PVWLAPNWEQTQRIGSPLRELD
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggaacaacgctacgattatattatcgtcggcgcggggtcggctggctgtgttttggca
gaccgactaacggaaaacggtgtgcactctgtattactattggaagcaggtggcagcgat
aaaagtatttttattcagatgccaacagccctttcttacccaatgaacaccgaaaagtac
gcttggcaatttgaaaccactgaagaggcgggtctagatggacgcaagctacattgtcct
cgcggtaaagtgcttggcggtagctcatccattaacggaatggtgtatgttcgcgggcat
gcttgtgatttcgaccaatgggaacagcaaggtgcaaaaggttggaactaccagtcttgt
ttaccctatttccgccgcgcagagtcttgggatggtggcagcgatgagtatcgtggtggg
gacggcccagttggcacttgcaatggcaataacatgactcgtaacccactctatcaagcc
tttatcgatgcaggcaaagaagccggttaccctgaaactcaagactacaacggttatcag
caagaaggctttggtccgatgcatatgaccgttgatggtggggtccgagcttctacatcc
aatgcctatctaaaacgtgccctcaagcgccctaacctcacgctgattaaaggtgtcatg
gttaataaagtcctattggaagctaagcaggctgtcggcgtccagtatgaaaagtctggt
attgtcgtcgatgccaaagtaaacaaggaggtcatttcgagtgctggttctatcggttca
gtgcagctcttgcagctttccggaatcggtcctaagaaggtgttggagcgcgcaggcgtg
acggtagaacatgacctcgctggtgtaggtgctaatcttcaagaccaccttgaagtgtat
ttccaataccactgctctcagccaatcacgctaaacagcaaactcggtttggtgagcaaa
gggcttattggcgcagaatggattcttactcgcaaaggcttaggtgcgaccaaccacttt
gaatcttgcgcgtttattcgttctcgtaaagggctgaagtggcccaacattcaataccat
tttcttccagctgctatgcgctatgacggacaagcggcttttgatgggcatggtttccaa
gtgcatgtggggcctaataaacccgagagccgtggcaccgtagagattcgttcggcaaat
ccacatgacaagccattaattgagttcaattacatctcgaccgagcaagatcgccaagat
tggcgagactgcattcgcctgactcgtgagattctaaatcaacccgcaatggatgcctac
cgcggtgatgagattcaacctgggctccatattcaaagcgacgacgctatcgatgagtgg
gtaaagcagaacgtagaaagtgcatatcacccttcttgcagctgcaaaatgggagccgat
aatgacccactagccgtgctcgacgagcagtgccgcgttcgcggtatcaaagcactacgc
gtggtcgattcttccattttcccaacgattccaaacggcaatcttaacggtccaaccatc
atggttgccgagcgcgctgccgacatcatcttgggtaaacctcttcaacaagacaagcaa
cccgtttggctcgccccgaactgggaacaaacacaacgaattggctctccattgagagag
ctggactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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