KEGG   Vibrio mediterranei: BSZ05_18525
Entry
BSZ05_18525       CDS       T04936                                 
Name
(GenBank) 3-methyladenine DNA glycosylase
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vsh  Vibrio mediterranei
Pathway
vsh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BSZ05_18525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vsh03000]
    BSZ05_18525
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_18525
Enzymes [BR:vsh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     BSZ05_18525
Transcription factors [BR:vsh03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    BSZ05_18525
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BSZ05_18525
SSDB
Motif
Pfam: Ada_Zn_binding AlkA_N HTH_18 HTH_AraC
Other DBs
NCBI-ProteinID: ASI91839
Position
2:396127..397500
AA seq 457 aa
MESLSREQCSVARLSRDPRFDGVFFVAVKTTGIFCRPICPANLPREENVEYFSTAPVALQ
AGYRPCLRCRPDSAPNSWAWLGKETSVRRALSLIEQGALQHSNLEALSDRLGVTSRYLRQ
LFQNHLGMSPKVYAQYHQLMFAKQLLHNSSLSITDVGFASGFNSTRRFNDAFKKYLKLTP
SEMRRHHARQDDSGRNVIHLAYRGQYHWESLLDFYRLRAIEGVEEVTQYSYTRYVEIDGS
LAWFKLHADVERKQTIKVEFELEDVTKLSWLMSNIKRVFDLNTDVALIEELLSKYDDQLI
IKSGLRLPGVWSTWEAGVRAVVGQQVSVKAAIGQLNSLTDTLDHTVSGQRVFPSADIVAR
SDLSFLKMPNSRKETLARLAHHVTNSPEDTPNNWLALKGIGPWTISYAKMRGASEPNLFL
DTDLIVKKYLAEHPQLNAANVSPWGSYATLHCWSHFS
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggagtcacttagtagagagcaatgttctgttgcccgattatcaagggatccaaggttt
gatggtgtattttttgtggcagtgaagacaacgggcattttttgccgccctatttgtcca
gcaaacttgccacgagaggagaatgttgagtatttctctacggcgcctgtagcgttgcag
gcaggatatcgaccttgcttgcgctgtcgtccggatagtgcgcctaattcgtgggcctgg
cttggtaaagaaaccagtgttcgacgagcattaagtttgatcgagcagggggcgttacag
cactccaatttggaagcgttgtcagataggctcggcgttaccagtcgatacttaagacaa
ctatttcaaaaccacctgggtatgtcacccaaggtgtatgctcaatatcatcaattaatg
tttgccaaacaactgcttcacaacagttcactatcaataactgatgttggttttgccagc
ggttttaatagcactcgacgattcaatgatgcctttaagaagtatcttaaattgacgcct
tcagaaatgaggcgtcatcatgcaaggcaagatgacagcggtcgcaatgtgattcatttg
gcttaccgaggtcaatatcactgggagtcgttactcgatttctatcgtttaagagcaata
gaaggcgtagaagaagtgacgcaatacagctacactcgttatgtggagattgatggtagt
ttagcttggttcaagttacatgctgatgtggagcgtaagcaaacaatcaaagtggaattt
gaattggaagatgtcacaaaactgtcttggttgatgagcaatataaaaagagtcttcgat
ttaaacaccgatgtggctttgattgaagagttgctatcgaaatacgacgaccagttaatt
attaaatcaggactgcggcttcctggtgtgtggtcgacttgggaagcgggggttcgagct
gtggttgggcagcaggtttcggtaaaagcagccatcgggcagctcaactcgctgactgac
actttggatcatacggtatctgggcagcgagtttttcctagtgcggatatcgtagcccgc
tccgaccttagtttccttaaaatgccaaacagtcgcaaagagacattagcccggttggct
catcatgttaccaattcgcctgaggacacaccaaataactggttggctctaaaaggtata
ggtccatggaccattagttatgcaaagatgaggggagcctctgagcccaacttgtttctt
gatacagatttgatcgttaaaaaataccttgctgagcacccacaattgaacgcagcgaat
gtgtcaccttggggaagctacgctacattacattgttggagtcatttttcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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