KEGG   Vibrio mediterranei: BSZ05_20495
Entry
BSZ05_20495       CDS       T04936                                 
Name
(GenBank) helix-turn-helix transcriptional regulator
  KO
K20918  LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vsh  Vibrio mediterranei
Pathway
vsh05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    BSZ05_20495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vsh03000]
    BSZ05_20495
Transcription factors [BR:vsh03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    BSZ05_20495
SSDB
Motif
Pfam: VpsT-like_REC GerE Sigma70_r4_2 Sigma70_r4 HTH_23 HTH_24 HTH_10 HTH_40 MutH HTH_11 HTH_30 HTH_Tnp_ISL3 HTH_20 Sigma70_ECF
Other DBs
NCBI-ProteinID: ASI92192
Position
2:844393..845076
AA seq 227 aa
MSVEKDGNNVHALLLAENSLQSGLLKDSIEQKVPITIKLMSAEKLYRSRDDVVEGDVRFI
IIDYAAIGHGTATHYHEIIESMDNSIKEILLNAPSDLEHAEMLKWQNLVGVFYASDTIET
LVSGFERILAGELWMSRKLVYEYVNFYRRRQCSKTSPYYTNLTKREQQIIKLLGDGASNT
EIAETLFVSENTVKAHLHNAFKKIKVKNRLQALLWVKNNIASSEFVQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgttgaaaaggatggcaacaacgtacacgcactattgttagcagagaacagtctg
caatccggtttgcttaaagattccattgagcagaaggttccgattaccatcaagttaatg
tctgcagaaaaactttaccgctcaagagatgatgtggttgagggggatgtgcgctttatt
atcattgattatgctgccatcggtcatggcactgccactcactatcatgaaattattgag
agtatggacaacagcatcaaagagattttattgaatgcgcccagtgatctagaacacgct
gaaatgcttaaatggcaaaatcttgtaggtgtcttttatgcctcagacactattgaaact
ttggtgtcgggctttgaacgtattttggcgggagagttgtggatgagcagaaaactggtc
tacgagtacgtgaatttctatcgtcgccgtcaatgctcaaaaaccagtccgtactatacc
aatctcacgaaacgagagcagcaaattattaagctgcttggtgatggtgcatccaataca
gagatcgctgagacgttgtttgtcagtgagaatacagtgaaagctcaccttcataatgca
ttcaagaaaattaaggtcaaaaaccgtttgcaagctttgttgtgggtgaagaacaacata
gcatctagtgaattcgttcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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