KEGG   Vibrio atlanticus: VS_0002
Entry
VS_0002           CDS       T00812                                 
Name
(GenBank) tRNA modification GTPase trmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vsp03016]
    VS_0002
Transfer RNA biogenesis [BR:vsp03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    VS_0002
 Prokaryotic type
   Methyltransferases
    VS_0002
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N ABC_tran AIG1 Ras Gtr1_RagA Roc SRPRB Arf AAA_18 AAA_28 AAA_29 DUF4702
Other DBs
NCBI-ProteinID: CAV17059
UniProt: B7VGH6
Position
1:complement(852..2255)
AA seq 467 aa
MNALFGFHMLAGTPMTTDTIVAQATAPGRGGVGIIRVSGPLATQVALEVTGKTLKPRYAE
YLPFKSHDGIELDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILAISGVRAAR
PGEFSERAFLNDKMDLTQAEAIADLIDASSEEAAKSALQSLQGEFSKRINTLVDSLIYLR
IYVEAAIDFPEEEIDFLADGKVSADLQAIIDNLEAVRQEANQGAIMREGMKVVIAGRPNA
GKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVEKIGIE
RAWEEIAQADRVLFMVDGTTTDATDPKDIWPDFVDRLPDNIGMTVIRNKADQTSEELGIC
HVNDPTLIRLSAKTGQGVDALRSHLKDCMGFAGGHEGGFMARRRHLDALERASEHLDIGQ
QQLEGYMAGEILAEELRITQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgaatgccctctttggctttcacatgctagcaggcacacctatgactacagatacgatt
gttgctcaagcgaccgcgccaggccgtggtggcgtcggtattatccgcgtttccggccca
ttggcgactcaggttgccctagaagtaacaggaaaaacacttaagcctcgctacgctgag
tacctgccgtttaaatctcacgatggcatcgaactcgaccaaggtatcgcgcttttcttc
cctaacccacattcgtttactggcgaagacgtgttagagctgcaaggccacggcggtccg
gtggtgatggatatgctaatcaaacgaatcctcgcgatctcaggcgtgcgtgctgcgcgt
ccgggtgagttttcagagcgtgccttcttaaacgacaagatggatttaactcaagccgaa
gcgattgctgacctgattgacgcaagctcagaagaagcggcgaaatctgcactacaatcc
ctgcaaggtgaattctcaaagcgtattaatacactggtagattccctgatttacctaaga
atctacgttgaagcggctatcgacttccctgaagaagaaattgatttccttgctgacggt
aaagtaagtgctgacttacaggctatcatcgacaatctcgaagctgtgcgccaagaagcc
aatcaaggtgccatcatgcgtgaaggtatgaaagtcgtgattgcaggtcgcccaaatgcg
ggtaaatcgagcctattaaatgcattgtcaggcaaagaatctgccattgtgactgatatt
gccggcactacgcgtgatgtactgcgtgaacatatccatattgatggcatgccactgcat
attattgataccgcaggcctacgtgaggcctctgatgaagtagaaaagataggtattgaa
cgtgcttgggaagaaatagctcaggcagaccgagttttatttatggttgatggcacaaca
acagacgcaaccgacccgaaagatatctggccagatttcgttgatcgtctaccagacaac
atcggaatgacggtaattcgtaataaagcggatcaaaccagtgaagagttaggcatttgt
catgttaacgatccaaccctgattcgcttatcagccaaaacaggccaaggtgtcgacgct
ctgcgtagtcatctaaaggattgtatgggctttgctggtggtcatgaaggtggctttatg
gcacgtcgtcgtcacttagatgccctagaacgagcatcagaacacctagatatcggccaa
cagcagcttgaaggctacatggcgggtgagattttagcggaagagcttcgaattactcag
cagcacctcaatgagatcacgggtgagttcagttcagacgatcttttaggtcgcatcttc
tcttcattctgtattggtaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

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