KEGG   Vibrio atlanticus: VS_0523
Entry
VS_0523           CDS       T00812                                 
Name
(GenBank) Probable (di)nucleoside polyphosphate hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vsp  Vibrio atlanticus
Pathway
vsp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VS_0523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vsp03019]
    VS_0523
Messenger RNA biogenesis [BR:vsp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     VS_0523
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: CAV17528
UniProt: B7VJ74
Position
1:541677..542195
AA seq 172 aa
MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMYRELYEEVGL
TKKDVKIVATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLDCDESHINMQRGSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFKERKTKGKRKLRRG
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgatagatggcgatggttaccgattaaatgttggtattgtaatctgtaacaaccatggt
caggtcttctgggctaaacgatacgggcaacattcatggcaattccctcaagggggaata
gatgaaggtgaaactccggaacaggcaatgtaccgcgagttgtatgaagaggttggcctt
actaaaaaggatgtaaagatcgtcgcgacaagtcgtcattggttacgctataagctgccc
aaacgactggttcggtgggattctaaacctgtctgtattggacaaaaacagaagtggttt
cttttacgcttagattgcgatgaatcgcatatcaatatgcagcgtggaagcacacctgag
tttgatggttggcgttgggtgagttactggtacccagttcgacaagttgtatctttcaag
cgagatgtttaccgtcgagcgatgaaagaattcgcatctttagcaatgccgtttaaagag
cgaaaaacaaaaggaaagcgcaaattgcgtagaggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system