KEGG   Vibrio atlanticus: VS_2494
Entry
VS_2494           CDS       T00812                                 
Symbol
ompU
Name
(GenBank) Outer membrane protein, OmpU
  KO
K08720  outer membrane protein OmpU
Organism
vsp  Vibrio atlanticus
Pathway
vsp01501  beta-Lactam resistance
vsp05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VS_2494 (ompU)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    VS_2494 (ompU)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vsp02000]
    VS_2494 (ompU)
Transporters [BR:vsp02000]
 Other transporters
  Pores ion channels [TC:1]
   VS_2494 (ompU)
SSDB
Motif
Pfam: Porin_4 Porin_1 DUF3869
Other DBs
NCBI-ProteinID: CAV19651
UniProt: B7VJI7
Position
1:2665838..2666884
AA seq 348 aa
MNKTMIALAVSAAALATGANASELYNQDGTSLEMGGRAEARLSMKDGNVQDNSRIRLNFL
GQVEIQDGLYGVGFYEGEFTTADNGGPTDSDSDSLTNRYAYAGLGGTFGEVTYGKNDGAL
GVITDFTDIMAYHGNSAADKINAADRADNMLSYKGQFQDLSLKASYRFADRNDDTANNVG
YTDNGQDGYSLSGIYAIGETGVKLGAGYADQDKNNEYMLSGSYTMGDLYFAGVFTDGEKD
FDRQYNSSNASSIGSKFTGVQDYTGYEVAAAYTLGQTVFSTTYNNAETGSDTSADNIAVD
ATYYFKPNFRGYVSYNFNLLSASDKLGTSTVGTKGAEDELALGLRYDF
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaacaagactatgatcgcgcttgctgtatctgctgcagctcttgctactggtgctaac
gcttcagaactatacaaccaagacggtacttctctagaaatgggtggccgtgcggaagct
cgtctttctatgaaagatggcaacgtacaagacaactctcgtatccgtcttaacttccta
ggtcaagttgaaatccaagacggcctatacggtgttggtttctacgaaggcgaattcaca
actgctgacaacggtggtcctacagacagcgatagcgacagcctaactaaccgttatgct
tacgctggacttggcggtacattcggtgaagtgacttacggtaaaaatgacggcgctcta
ggcgtaatcactgactttaccgatatcatggcttaccacggcaactctgcagcagacaaa
atcaatgctgctgaccgtgctgacaacatgctttcttacaaaggtcaattccaagaccta
agtcttaaagcaagctaccgttttgctgaccgtaacgacgacactgcaaacaacgtaggc
tacactgacaacggtcaagacggctactctctatctggtatctacgcaatcggtgaaact
ggcgttaaactaggtgctggttacgcagaccaagataagaacaacgaatacatgctttcg
ggctcttacactatgggcgacctatacttcgctggtgtattcactgacggagaaaaagat
tttgaccgccagtacaactcttcaaacgcttcaagcattggtagcaagttcacaggtgtt
caagactacactggttacgaagtagcagccgcttacactctaggtcaaactgtattctca
accacatacaacaacgcagaaacaggtagcgacacatcggcagacaatatcgctgttgat
gcaacgtactacttcaagcctaacttccgtggttacgtatcgtacaacttcaacctacta
agcgctagcgacaagctaggtacttcaacagttggtactaaaggtgctgaagacgagctt
gctctaggtctacgttacgacttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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