KEGG   Vibrio atlanticus: VS_3098
Entry
VS_3098           CDS       T00812                                 
Name
(GenBank) ThiC, thiamin biosynthesis protein
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
vsp  Vibrio atlanticus
Pathway
vsp00730  Thiamine metabolism
vsp01100  Metabolic pathways
vsp01240  Biosynthesis of cofactors
Module
vsp_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    VS_3098
Enzymes [BR:vsp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     VS_3098
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: CAV20365
UniProt: B7VMV7
Position
1:complement(3242439..3244388)
AA seq 649 aa
MSSRKQARLEAKNFIDSLSVQPYPNSKKAYIQGSREDIQVPVREISLADSLVGGTKKEPV
FEPNVPIQVYDTSGVYTDPTHQIDLYSGLPKLREQWIDERGDTELLDDVSSVYTKERLED
ETLDDLRYGNLPRIRRATDEQCVTQLHYARQGIITPEMEYIAIRENMGRQKFADEQLNHQ
HPGHNFGANLPKEITPEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAEDLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSIADANDEAQFSELRTLGELTKVAW
EYDVQVIIEGPGHVPMHLIKENMDEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPETARSFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAIEIKMLDNPLEGMRQKSQEFRDTGSELYHPAVGAKEAQLEE
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgtcgagtcgtaaacaagcaagactggaagcgaagaatttcatcgattctttatccgta
caaccttatccaaattcaaaaaaagcttacatccaaggatctcgagaagatattcaagtc
cctgtacgagaaatatcacttgctgatagccttgtcggtggtaccaaaaaagagcctgta
ttcgaacctaatgtacccattcaagtttacgatacctcaggtgtttacactgaccccaca
catcaaatagacctgtatagcggccttccaaagttgcgtgagcaatggattgatgagcgt
ggtgatacggaactgttagacgatgtaagctctgtttacactaaagaacgtttagaagat
gaaactctagacgaccttcgttacggcaacctacctagaattcgtcgcgcgactgacgag
caatgtgttactcagctgcactatgctcgtcaggggattatcactcctgagatggagtat
attgctatacgtgagaacatggggcgtcagaagtttgctgatgagcagcttaaccaccaa
catcctggccataactttggcgcaaatctaccgaaagaaattacccctgagtttgtgcgc
aaggaggttgctgaaggtcgagctattatcccttcaaacatcaaccacccagaatcagaa
ccgatgattattggccgtaacttcttagtgaaggtgaacgctaatatcggtaactcttca
gtaagctcttcgattgaagaagaagttgagaagttagtatggtcaactcgctggggtggc
gataccgtaatggacctttctaccggccgtaatattcacgaaactcgcgaatggatctta
cgtaacagccctgtaccaatcggtacggttcctatgtatcaagcccttgaaaaagtgaat
ggtgttgcggaagaccttaactgggaagtgatgcgcgatactttgattgaacaagcagag
cagggtgttgattacttcactatccacgcaggtttgttgcttcgctacgttccgatgacg
gctaaacgtgtcaccggcattgtttctcgtggtggttctattatcgcgaaatggtgtctt
gctcatcaccaagagagcttcctttatactcacttccgcgagatctgcgagatctgtgcg
aagtacgatgtggctctgtcattaggtgatggcctacgcccgggctctattgcagatgcc
aacgatgaggctcaattctcggagctacgtactctaggtgagctgactaaagttgcttgg
gaatatgatgttcaggtgatcattgaaggacctggacatgtaccgatgcacttaatcaaa
gagaatatggacgagcagttagaacactgccatgaagcacctttctatacgttaggcccg
ttgacgacagatattgcaccgggttatgaccatattacctctggaattggcgcggccatg
attggttggtacggctgtgcgatgctctgctatgtcacacctaaagagcatttaggtcta
ccaaataaagaagatgtgaagactggcctgattacttacaagctggctgcacacgcagca
gacttggctaaaggacatccgggtgcacaaatccgagataacgctttatcaaaggcacgt
tttgaattccgttgggaagaccaattcaacctagctcttgatcctgaaactgcgcgttct
tttcatgatgaaaccttaccgcaagagtcggggaaggttgctcacttctgctcaatgtgt
ggacctaaattctgctcgatgaagatctctcaggaagtccgagagtatgcgaaagataca
gaacaagtagccgcggatcaggctatcgagattaagatgctagataacccattggaaggg
atgcgtcagaaatcacaagagttccgtgatactgggtctgaactttaccaccctgcagta
ggtgcaaaagaagctcaattagaggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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