KEGG   Vibrio tapetis subsp. tapetis: A1658
Entry
A1658             CDS       T05424                                 
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
vta  Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:vta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vta03009]
    A1658 (ymfC)
Enzymes [BR:vta01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     A1658 (ymfC)
Ribosome biogenesis [BR:vta03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A1658 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: SON49637
UniProt: A0A2N8ZCK4
Position
A:1745182..1745865
AA seq 227 aa
MSFRSRGANPKSAHRSGKPGFKQGPGHSSTHRKKPRTESKPRINAADRKVLIFNKPYDTL
SQFTDGDGRKTLADYIDVKDVYAAGRLDRDSEGLLILTNDGILQAKLTQPSSKSPKTYWV
QVEGAPTDEDLEKLRKGVELKDGMTLPAKVEVLDEPTLWDRSPPVRFRAAIPTTWLAITI
IEGRNRQVRRMTANIGFPTLRLIRHSMGQWQLDDLQPGEYKEVDVKL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtcattccgttctcgcggcgcaaacccgaaatctgcacaccgctctggcaagccaggt
tttaaacaaggtcctggtcattcatcgacccacagaaagaaaccaagaacagagtcaaaa
cccagaatcaacgcagcggatcgaaaagtgctcatctttaacaaaccttatgataccttg
agccagttcaccgacggtgacggtcgcaaaacgttagcagattatattgatgtcaaagat
gtgtacgccgcaggtcgccttgatcgtgacagcgaaggtctgttgatattaacaaatgac
gggatattacaagccaagctcacccaacctagctcaaaatcccccaaaacttattgggta
caagttgaaggcgcacctaccgacgaagatctagaaaaactgcgtaaaggtgttgaacta
aaagatggcatgacactgccagcaaaagtggaagtattagatgaaccgacactttgggac
cgctcccctcctgttcgctttcgcgccgcaatccccactacctggcttgcaattaccatc
attgaaggtcgcaatcgtcaagtaaggcgaatgaccgctaatatcggcttccctactctg
agattaattaggcattcaatgggccaatggcaattagacgatttacaaccaggtgaatac
aaggaagtagacgttaaactctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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