KEGG   Vibrio tapetis subsp. tapetis: A2225
Entry
A2225             CDS       T05424                                 
Symbol
flrA
Name
(GenBank) Sigma 54 transcriptional activator
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vta  Vibrio tapetis subsp. tapetis
Pathway
vta02020  Two-component system
vta02040  Flagellar assembly
vta05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A2225 (flrA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    A2225 (flrA)
  09142 Cell motility
   02040 Flagellar assembly
    A2225 (flrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vta03000]
    A2225 (flrA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vta02035]
    A2225 (flrA)
Transcription factors [BR:vta03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    A2225 (flrA)
Bacterial motility proteins [BR:vta02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    A2225 (flrA)
SSDB
Motif
Pfam: Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase HTH_50 bpMoxR MCM AAA_7 AAA
Other DBs
NCBI-ProteinID: SON50204
UniProt: A0A2N8ZE64
Position
A:complement(2348993..2350465)
AA seq 490 aa
MQGLAQMLVIEDDQQVRHDLSIILDFIGEQGNVFGSHQIDQIDWSGEWASCILGSLNSTA
DIASITKKLQQANHIPLLALGTNAIQVEEFPHFVGELQLPLNYPQLSDALRHCQDFLGKK
GRPLPALSRKNTLFRSLVGQSQSIQDVRHLIEQVATTEANVLILGESGTGKEVVARNIHY
HSPRRKGPFVPINCGAIPPDLLESELFGHEKGAFTGAITSRKGRFELAEGGTLFLDEIGD
MPMPMQVKLLRVLQERSFERVGGNVTVKANVRVVAATHRNLERMIDDESFREDLFYRLNV
FPIDMPALKDRNEDIPLLLKELMTRMEAEGGQPFCFTPRAINSLMEHDWPGNVRELANLI
ERMVILFPNSLVDVNHLPTKYRYSDIPEFHPENQTQNKSIEEQERDILADIFSEDFSLDD
VPMDIEEGVDHPQELPAEGVNLKELLADVEINMINQALEAQNGVVARAADMLGMRRTTLV
EKMRKYNLNR
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgcaaggcttagcacaaatgctggtcattgaagatgatcaacaggttagacacgattta
agcattatcctcgactttataggcgagcaagggaacgtttttggctcacatcaaattgat
caaattgattggtctggcgagtgggctagctgcattttaggttcattgaattctaccgct
gatatcgcttctattacaaagaagcttcagcaggcgaaccacattcccttattggcttta
ggcactaatgcaatccaagttgaagagtttcctcatttcgtaggagagcttcagctgcct
ctaaattacccacagctcagtgatgctcttcgtcattgccaagattttttaggtaaaaaa
ggtcgccctcttcccgctttatcccgtaaaaatacgttatttcgcagcctggtaggtcaa
agccaaagtattcaagatgttcgccatctcattgagcaagttgccacaactgaagccaat
gttcttattcttggtgaatcaggcacgggcaaagaagtagtggcacgtaatattcattac
cactccccaagacgcaaaggtccttttgtacccattaactgtggtgcgatcccacctgac
ttattggaaagtgagttatttggccacgaaaaaggcgcatttactggtgcaattacttca
cgtaaaggtcgttttgaacttgctgaaggtggcacgctgtttttagatgagattggcgat
atgccaatgcctatgcaagtgaagttgttgcgagtactgcaagaacgtagctttgagcgt
gtcggtggaaatgtaacggttaaagcgaatgtccgcgtggttgcggcaacacaccgtaac
ttagaacgcatgattgatgatgaaagcttccgtgaagatctcttttatcgtttgaatgtt
ttccctattgatatgcctgcgttaaaagatagaaacgaagatatccctcttttattaaaa
gagctgatgacgcgtatggaagcagaaggcggacagccattttgtttcacgcctcgtgct
atcaactctttaatggagcatgattggccagggaacgttcgagaacttgcgaacttaatt
gagcgaatggtgatcttgttcccaaatagtttggttgatgtgaatcatttaccgactaaa
tatcgatatagtgatattcctgaatttcatcctgaaaatcaaactcaaaataagagtatt
gaagagcaggaacgcgatattttggccgacattttttctgaagatttcagcttagatgac
gtacctatggatatcgaagaaggggttgatcaccctcaagagcttcccgctgaaggcgtt
aaccttaaagagttgctagcggatgttgaaatcaacatgatcaatcaagccttagaagca
caaaatggtgtggtggcgagagccgccgatatgctcggtatgcgcagaacaaccttggtt
gaaaaaatgcggaagtataatttgaaccgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system