KEGG   Vibrio tapetis subsp. tapetis: A2368
Entry
A2368             CDS       T05424                                 
Symbol
ygdE
Name
(GenBank) putative methyltransferase
  KO
K06968  23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
Organism
vta  Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:vta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vta03009]
    A2368 (ygdE)
Enzymes [BR:vta01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.186  23S rRNA (cytidine2498-2'-O)-methyltransferase
     A2368 (ygdE)
Ribosome biogenesis [BR:vta03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A2368 (ygdE)
SSDB
Motif
Pfam: RLMM_N RlmM_FDX FtsJ Ish1
Other DBs
NCBI-ProteinID: SON50347
UniProt: A0A2N8ZEJ5
Position
A:complement(2487334..2488425)
AA seq 363 aa
MKHLMLYCRQGFEKECAGEIQDKASQLEVFGFPRVVKNSGYVLFECYQAGEAAKLVKELD
FKALIFARQMFVVAAEFKELPTEDRISPILVSLSEIEAMPMCGDLVVETPDTNEAKELLK
FCRKFTVPLRQAMRGKGLLFKKENAKKPQAHVCFVAPGHCYVGYSLPQNNSAFFMGIPRL
KFPADAPSRSTLKLEEAFHVFIPREEWDTRLASGMWAVDLGACPGGWTYQLVKRSMFVHA
IDNGMMADSLMDTGQVKHHMEDGFKFEPPRKNVTWLVCDMIEKPSRVAQLMGEWIISGWA
QEAIFNLKLPMKGRYDEVLGDIENLKKFLIEHKVQFKLQAKHLYHDREEITVHVQSLSNI
SPH
NT seq 1092 nt   +upstreamnt  +downstreamnt
gtgaaacacttaatgctttattgccggcaaggctttgaaaaagagtgtgctggagaaatc
caagacaaagcaagccaactggaagtatttggctttccacgtgtagtaaaaaactcaggt
tatgtattgtttgagtgctaccaagctggtgaagccgcgaagttggtcaaagaattggat
ttcaaagcgctgatttttgctcgccagatgtttgtggttgccgcagagtttaaagaattg
ccaacagaagaccgcatttctcctattttggtctctctgtctgaaattgaagcgatgcca
atgtgtggtgatttggtggtggaaacaccggatactaatgaagcgaaagagctgcttaag
ttttgtcgtaaatttactgtgccgcttcgtcaagcaatgcgtggtaaaggcctgttgttc
aaaaaagaaaacgcgaaaaagcctcaagcgcacgtgtgtttcgtggctccaggtcattgt
tatgtgggctactcattgccacaaaataactcggcgttcttcatgggcattcctcgtttg
aaattcccagcagacgcaccaagccgttcaactcttaaacttgaagaagcatttcatgtg
tttattccacgtgaagagtgggacacacgtcttgcttctggaatgtgggcggtagatttg
ggtgcatgcccaggtggctggacttaccaattggttaagcgttctatgtttgttcacgcg
attgataatggcatgatggcagacagcttgatggatacgggacaagttaagcaccacatg
gaagacggcttcaaatttgagccaccaagaaagaacgtaacttggctggtatgtgacatg
atcgaaaaaccgtctcgtgttgctcagttaatgggtgagtggatcatttctggttgggct
caagaagcgatatttaacctgaagcttccaatgaaaggtcgctatgatgaagtgcttggc
gatattgaaaacttgaagaaattcttaattgaacacaaggttcagtttaagcttcaagct
aagcatttgtaccatgaccgtgaagaaattaccgttcacgtacaaagcctgtcgaatatc
tctccgcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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