KEGG   Vibrio tapetis subsp. tapetis: P0058
Entry
P0058             CDS       T05424                                 
Symbol
hsdR
Name
(GenBank) Type I restriction modification system deoxyribonuclease subunit HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vta  Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:vta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vta02048]
    P0058 (hsdR)
Enzymes [BR:vta01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     P0058 (hsdR)
Prokaryotic defense system [BR:vta02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   P0058 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 ResIII EcoR124_C HSDR_N DEAD AadA_C
Other DBs
NCBI-ProteinID: SON53502
UniProt: A0A2N8ZHQ3
Position
P:54475..57591
AA seq 1038 aa
MTYTKEALFEQDVITELCKKGWEDTVLKNLTEADLLQNWADILFQNNNSIDRLNNAPLTG
SEMQQIVEQITSLKTPLKLNGFINGKTVSIKRDNPDDALHYGKEISLHIYDRQEIAAGKS
RYQIVQQPRFNRKSAVQHDRRGDLLLLINGMPVIHLELKRSGVPVIEACNQIEKYTHEGH
FSAGIIALVQVFVAMTPDHSLYFANPGKDGRFNHDYYFQWADFSNEPVNHWHKVITDLLS
IPMAHQLIGFYTVADNADGVLKVMRSYQYYATNAISSKISGLDWSVKNKGGYIWHTTGSG
KTMTSFKSAQLIANSGDADKVVFLMDRIELGTQSLEEYRSFADATDEVQGTENTHVLITK
LKSTKPGDCLIVTSIQKMSNIQDEGQLKTADIEKINQKRIAFIVDEAHRSTFGDMLTDIK
KTFPNAVFFGFTGTPIQEENQKKDSTTSTIFGDELHRYSIRDGIRDGNVLGFDPYKVMTY
KDSDLRSAVALEKAKVNTHAEVFGDPVKEKAYDKYMDSARVPMATSEINGKTVRGIEALL
PASQYDRIEHKQKVMDDILGNWTRFSRANKFHGIFATHNIPEALEYYRLFKQQAPHLKVT
ALFDPNIDNKGGAIAKEAGLTEIIEDYNNTYNTTYTLPTHAQFKKDIAARLAHKKPYQHA
EQQPDQQLHLLIVVDQMLTGYDSKWVNTLYLDKTLEYANIIQAFSRTNRLFGLDKPFGNI
RYYRKPHTMEQNINKALKLYSGDRPFGVFVDKLEDNLNHLNEVFADIEVLFNNEQITYFG
QLPKDEAVQAKFASLFNEFNKYLEAAKVQGFDWQESSYQFEDTGSAVDVAFTESQHQTLL
QRYKELSSGGDGGGNEPAVPYAIWGYLTEQNTGRIDHNYMNAQFSKFLKQLSQPNVTPEQ
MQQTRDELHKSFASLSQDEQKQAHKLLIDVQAGNLIIESGKTLQDYITRAQVEEENEALQ
IIVDALGLDGQLLKSLKTGQVTAANLNNFGRFDTLKASVDKAKAKAYLEAKLDKTLPPPK
VNIELDKLLREFVLQKED
NT seq 3117 nt   +upstreamnt  +downstreamnt
gtgacctacaccaaagaagctttattcgaacaggatgtaattaccgaactttgtaaaaaa
ggctgggaagatactgttctaaaaaacctcactgaagcggatttactgcaaaactgggca
gatattctctttcaaaataacaatagcattgatcgcctcaataacgcaccgctaaccggc
agcgagatgcagcagattgttgaacagataacctcgcttaaaacgcctttaaaactcaat
ggctttattaacggtaaaaccgtatccataaagcgagataaccccgacgatgcgctgcat
tatggcaaagagatcagcctgcatatctacgaccgccaagagatcgcggcgggtaagagc
cggtatcaaattgttcagcagccaagatttaaccgcaaaagtgccgtgcagcatgaccgc
agaggcgatctgctattgctgattaacggcatgcctgtcatccatctggagctaaaacgt
tccggtgtacccgtgatcgaagcgtgcaaccaaatagagaaatacactcatgaaggccac
tttagcgcaggcattattgcactggtgcaagtatttgtggcgatgaccccagaccacagc
ctctattttgccaatcccggcaaagatggccgctttaatcacgattactacttccaatgg
gcagatttttctaacgagccggtgaaccattggcataaagtgattactgatctgctttct
atccctatggcacaccagttaataggtttttacactgtggccgacaatgctgatggcgta
ttaaaggtgatgcgcagctatcagtactatgccactaacgccatttccagcaagataagt
ggccttgactggtcggtgaaaaacaaaggtggttatatctggcacaccacaggctctggt
aaaaccatgaccagctttaaatccgcgcagcttatcgctaactcaggggatgccgataaa
gtcgtatttctgatggatcgtattgagctgggcactcagtcgttggaagagtatcgcagt
tttgccgatgccacggatgaagttcagggcacggaaaatacccatgtattaatcaccaag
ctaaaaagcaccaagcctggcgattgcctcattgttacctctatccaaaaaatgagtaac
attcaggatgaaggtcagttaaaaaccgccgatattgagaaaattaaccaaaagcgtatt
gcctttattgttgacgaagcgcaccgctctacctttggcgatatgctaactgacattaaa
aaaacattccctaatgcggtgttttttggctttactggcaccccgattcaggaagaaaac
caaaagaaagacagcacgaccagtacgatttttggcgatgaactacaccgttatagcatt
cgcgatggcattcgtgacggcaacgtgctgggatttgatccctataaggtgatgacctac
aaagatagcgatttacggagcgctgttgccctcgaaaaggccaaagtgaatacacatgcg
gaagtgtttggcgatccagtaaaagaaaaagcttacgataagtacatggacagtgcacga
gtgcccatggctacgtccgagattaacggcaaaaccgtgcgtggcattgaggcattgctg
ccagccagtcaatatgaccgcatcgagcataagcaaaaagtgatggatgacatactgggt
aactggacacgattcagccgcgccaacaagtttcatggtatttttgccacccataacatt
cccgaagcgctggaatattatcgcctatttaagcaacaagcccctcatttgaaggttaca
gctctgtttgacccgaatattgacaataaaggcggcgcgatagcaaaagaggccggctta
accgagattattgaagattacaataacacctacaacaccacttataccctgccaacccat
gcgcagtttaaaaaggatatcgcggcacgactcgcccataaaaagccttaccaacacgca
gagcagcaaccagatcaacaattgcacctgttgattgtcgttgaccaaatgctgacgggg
tacgattcaaaatgggtgaataccctctatctggataagacgctggaatacgccaatatc
attcaggcgttttcacgcactaaccgtctgttcggtttggataaacctttcgggaatatc
cgttattaccgtaaaccacataccatggagcagaacatcaataaagcgctcaagctttac
tctggggatcgtccttttggtgtcttcgtcgataagctggaagataatcttaatcacctc
aatgaggtgttcgcagacattgaagtgctgtttaacaatgagcaaatcacgtactttggg
cagctgccgaaagacgaggctgttcaagctaagtttgcgagcttattcaatgagttcaat
aagtatttagaagcggccaaagtgcaaggattcgactggcaggaaagcagctatcagttt
gaggatacgggcagtgcggtagatgtggcctttaccgaatcgcagcatcaaaccctattg
cagcgctataaagagctatcatctggtggtgacggtggggggaatgagcccgccgtacct
tacgccatttggggttatttgacagagcaaaacacggggcgaattgatcataactatatg
aatgcacagttttctaagtttctaaaacagcttagccaacccaatgttacgcctgagcag
atgcagcaaacacgagatgagctacacaaatcttttgcgagtttaagtcaagatgagcaa
aagcaagcccataaactgcttattgatgtacaagcaggtaacttgattatcgaatccggg
aaaacattgcaggactacattactagggcgcaagtagaagaagaaaatgaagctttgcaa
attattgtcgatgcgttggggctagatgggcaactgctaaaatcactgaaaacaggtcag
gttactgctgcaaacctgaataacttcggacgctttgacacactgaaagccagtgtcgat
aaagccaaggcaaaggcttatttggaagcaaagttagataaaacgttaccgccacctaag
gtgaacatcgagctggataagcttctaagagagtttgttttacaaaaagaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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