KEGG   Vibrio tubiashii: IX91_01300
Entry
IX91_01300        CDS       T03445                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
vtu  Vibrio tubiashii
Pathway
vtu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vtu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    IX91_01300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vtu03021]
    IX91_01300
   03400 DNA repair and recombination proteins [BR:vtu03400]
    IX91_01300
Enzymes [BR:vtu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IX91_01300
Transcription machinery [BR:vtu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IX91_01300
DNA repair and recombination proteins [BR:vtu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IX91_01300
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AIW12869
UniProt: F9T880
Position
1:262992..263984
AA seq 330 aa
MQGSVTEFLKPRLVDIEQVSTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYSVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq 993 nt   +upstreamnt  +downstreamnt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgacatcgaacaggttagc
acgactcacgcaaaagtaactcttgagccattagagcgtggttttggccatactcttggt
aatgcacttcgccgtattcttctatcttctatgccaggttgtgctgtaacagaagtagaa
atcgaaggcgtacttcatgagtacagcactaaagaaggcgttcaagaagatattcttgaa
atcctacttaaccttaagggtttagctgtacgtgttgccgaaggcaaagatgaagtgttc
attactttgaacaaatcaggctcgggccctgtggttgcaggtgacatcacccatgatggt
gatgtagagatcgctaaccctgaacacgttatttgtcacctaacagatgacaacgctgag
atcgcaatgcgcatcaaagttgaacgtggtcgtggttatgttccggcttcggctcgtatc
catactgaagaagatgagcgtccaattggtcgcctactggttgacgctacgtacagccca
gtagacaagattgcttactctgttgaagcggctcgtgtagagcagcgcacagacttagac
aagcttgttatcgatatggaaacgaacggtactctagaccctgaggaagcaatccgtcgt
gcagctactatcctagctgagcaattggatgcgttcgtagatctacgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatcttgtacagcgtactgaggttgagctacttaaaacgcctaacctgggtaaaaaatct
cttacagagatcaaagacgtacttgcatcacgtggtctttctcttggcatgcgcctagaa
aactggccaccagcgtctatcgctgaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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