KEGG   Vibrio tubiashii: IX91_06380
Entry
IX91_06380        CDS       T03445                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vtu  Vibrio tubiashii
Pathway
vtu03420  Nucleotide excision repair
vtu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vtu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    IX91_06380
   03430 Mismatch repair
    IX91_06380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vtu03400]
    IX91_06380
Enzymes [BR:vtu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IX91_06380
DNA repair and recombination proteins [BR:vtu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IX91_06380
   MMR (mismatch excision repair)
    Other MMR factors
     IX91_06380
SSDB
Motif
Pfam: UvrD-helicase AAA_19 AAA_11 AAA_30
Other DBs
NCBI-ProteinID: AIW13825
UniProt: F9T1W0
Position
1:complement(1374426..1376645)
AA seq 739 aa
MTNIRELLSCNQDLDANPFTDDDIQWVEGILGLNNGFDEHQLLVLQRLDDLDVEACPGSG
KTTVLVAKLALLARYWNSKTHGICVLSMTNAAREEIQERLGETEEGQKLLSGPHFIGTIH
SFFSEFLAKPYLNSKGIAIVNIDDDFCRSQRLRTLQKDNYSEVADYLVAKQVEKKTNIVT
TKGEHTPDHQKAAAWLAEYEAKSLEERRYGIPSSWKITDESYNLIRVNFGKEYSLDLPEP
MESLLKECIKEVAHKGIFCFSDLFVYAKALMKSSSDVFQILRKRFPLLFIDEAQDTSSSQ
ALILYELFMSYIDDLEPVTRQRFGDANQTIYTFEPPMAADGIDPYPSSDIERLSLPVSHR
FDMSVSDIACKFETHPLSPMMQGVRQDDKGGRGHCILVFNEDSRMAVIPAFAELVAKEME
ELDLDLAKFRICSHIQKEKDTEVSEGNYARTIRDYFTPYIADKMTKDYQQHKALISYFRH
ARYLVRETKCLSSGLEKVSEGILKGCYLVSVDSEQTKGTRYAKIKSAPNKYRAIVREIND
KCAKDFSNKVVDTLTNNAGITETEWPAIISIATDVIQSLLGIEEVDSSFEFLTWKGEDVP
PQSSDTGDVDRTNIYRHELLPSRKKLDFKLGTIHSVKGQTHTATLLLDCTNRGPILGQLK
PFFLGSKLTSEATTQQKSWLNTLYVGLTRPTHLICVAIPESHNGFRGSTLSWTEDDFQEL
KAKGWKVARVKECSSLEYL
NT seq 2220 nt   +upstreamnt  +downstreamnt
gtgactaatattcgagagcttttaagctgcaatcaagacttagacgctaatccatttacg
gatgatgatatccagtgggttgaaggtattctcgggctgaacaatggatttgacgagcat
cagttgcttgttctgcaaaggcttgatgatttagatgtagaggcatgccctgggagcggg
aaaactacagtattagtcgcaaagttagctttattagctaggtactggaactcaaaaaca
catggcatttgtgtgttatctatgactaatgccgctagagaggagattcaggagagactt
ggggaaactgaagagggccaaaagttactaagtggcccccattttattgggacgatccac
agttttttcagtgagttcttagcgaagccgtatttgaactccaaggggattgcgattgtt
aatattgacgatgatttttgtcgctctcagcgacttagaacacttcagaaggataattat
agtgaggtggcagactatctagtagctaagcaggttgagaagaagactaacatagtcaca
actaaaggagagcatactccggatcatcaaaaagctgctgcatggctagcggagtacgaa
gcaaaatctttggaagaacggaggtatggaattccttcaagttggaaaattaccgatgag
tcgtacaacttgattcgagttaacttcggaaaagaatattctcttgatctaccagagcca
atggagagcttgctgaaagagtgtattaaggaagtagctcataaagggatattttgcttc
agtgatttatttgtgtatgcaaaagcacttatgaagtcttcgagtgatgtattccaaatt
cttaggaaacgatttccattgctgtttatcgatgaagcccaagatacatctagctcacaa
gctcttattttatacgagttattcatgtcctacattgatgatctcgaaccggttacaaga
caacgatttggtgatgcaaatcaaacaatttatacatttgaaccaccaatggctgcggat
ggaatagatccatacccatcatctgatattgaaaggctctcacttccagtgagtcatcga
tttgatatgagtgtgtctgatatagcatgtaagttcgaaactcaccctcttagccctatg
atgcaaggagtaagacaggatgataaggggggaagagggcattgtatcttggtattcaat
gaggactcaagaatggctgtgattccggcattcgcagaacttgttgctaaggagatggaa
gagcttgaccttgacctagcaaaattcagaatttgttctcatatacagaaagaaaaagat
acagaagtttctgaaggtaactacgctagaacgattagagattactttaccccttatata
gcggacaagatgacgaaagattatcagcaacataaagctctgattagttacttccgtcat
gcccgatatttggttagagagactaaatgcttaagttctggtctcgaaaaagtatcggaa
ggtatcttaaaagggtgctatttggtaagtgttgatagtgaacagaccaaagggactcgt
tacgcaaagattaaatcagctcctaacaagtacagagcgatcgttagagagatcaatgac
aagtgtgcaaaagatttttcgaataaagttgttgacacacttacaaataatgcgggtata
actgaaacggaatggcctgccattatctcaattgcgactgatgttattcaatcgctatta
gggatagaagaagttgactcttctttcgagttcctaacatggaaaggtgaagatgtcccc
cctcagagcagtgatactggagacgttgatagaaccaacatctatagacatgagcttctg
ccatcaaggaaaaagttagattttaaattaggtactatccactctgttaaaggacaaacc
catacggccacattattgttagattgtacaaatagaggacctattttaggccagctcaaa
ccattctttcttggttcaaaactcacatcagaagcaaccactcagcaaaaaagttggtta
aacactctatacgtaggcttaactcgccctacgcatttgatttgtgtcgcgattcctgag
tcccataatggctttagaggaagtaccctttcttggacagaagatgactttcaggaacta
aaagctaagggctggaaagtagctagagtgaaagagtgttcgtctttggaatatctataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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