KEGG   Vigna unguiculata (cowpea): 114182455
Entry
114182455         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114182455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114182455
Enzymes [BR:vun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114182455
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     114182455
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 114182455
NCBI-ProteinID: XP_027925124
Position
4:404032..424217
AA seq 1159 aa
MVLNHDPSQQPMNGNGGNKVPDDSGFDQRILTAPVKSAVDKFQLLPEFLKVRGLVKQHLD
SFNFFVKTEIKKIVRANNLIRASRHPHIYLRFLNVKIRKPSIVDESVTDEVTPQTCRLSD
QTYAAPICVDVEYTHGSRDDPRLHRRLNVEIGRMPIMLRSCCCVLYGRDEAELAKLGECP
LDPGGYFVIKGTEKVILIQEQLSKNRIIIETDKKGNIAASVTSSTEKIKTKTVIVVENEK
FWLHLNQFPKKVPLMVVMKAMGMESDQEVTQMVGRDPRYSYLLLASFEECRKCNVYTQEQ
ALEYLDKMVKRSMYSSNSAEKESRAFSVLRDVFLANVPVDGDNFRTKCIYVAVMMRRIMD
AILNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDI
STLLNRTQNIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFE
KSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISMCYSLGV
EDLELLSAEELHTPDSFLVILNGLILGKHRKPLRFANAIRKLRRVGKIGEFVSVFVHNKQ
HCVYLASDGGRVCRPLVIADKGVSRIKEHHMKELMDGVRTFDDFLRDGLLEYLDVNEENN
TLIALYEGDATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFN
QLRRNDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKA
SLDRGFGRCIVMKKYSAVIQKHSNDTSDRILRPNRAADTAGRMRVLDDDGIAAPGEILKP
FDIYINKQSPIDTRTPKASAANLPDSAYRSNAQSFKGHGGEVVDRVVLCSDKDKNMCIKF
LIRHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKM
IELLGGKAGVSCGRFHYGSAFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPL
QAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAY
GASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKL
MIQELQSMNIVPRLKLADA
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggttctcaatcacgatccttcgcaacaacccatgaacggcaatgggggcaacaaggta
ccggatgattctggttttgaccaaaggattctaactgctccggtgaaatctgctgttgac
aagttccaacttcttcccgagttcctcaaggtgaggggattggttaagcaacatttggat
tcctttaacttttttgtgaagacagaaataaaaaaaatagttcgggctaacaatttgatc
agggcgagtaggcacccacatatatatctgaggtttttaaatgtcaaaattcgtaaacca
tcaatagtggacgaatctgttaccgatgaagttactccacaaacatgccgcctaagtgac
caaacgtatgctgctcctatatgtgttgatgttgagtacacacatggaagtcgtgatgac
ccacgtttacatagaaggctcaatgttgaaattggaagaatgcctattatgctgcggagt
tgttgttgtgtcttatatgggagagatgaagctgaacttgctaaactcggtgagtgcccc
cttgatcctggagggtattttgtaatcaaagggactgagaaggtgattttgatacaagag
cagctctcaaagaatagaataattatagagactgacaaaaaaggaaacatagctgcatct
gttacaagcagcacggagaaaataaaaacaaaaactgttattgtagtggaaaatgagaag
ttctggttacatttgaatcaattccctaagaaggttcctctaatggtagttatgaaggct
atggggatggagagtgatcaagaagttacgcagatggttggaagagatcctcgttatagt
tatctactgttggcctctttcgaggaatgtagaaaatgcaatgtatatacacaagagcaa
gcattggagtaccttgataagatggtaaaacgttccatgtattcaagcaattcagctgaa
aaggaatcacgagcattttctgtcctaagagatgtttttcttgcaaatgtgcctgtggat
ggagataattttcggacaaaatgtatatatgttgctgttatgatgagacgcataatggat
gcaattttaaataaagatgctatggatgacaaggattatgtgggtaacaagcggttggag
ctatctggccagttagtatcactactttttgaggatctcttcaagtcaatgacaactgaa
gttaagaacttgacagacaaaatgttagataagccagacaaggctaagaatttcgacata
tctacgcttcttaatcggactcagaatatcatcactctaggcctggaaaggacactctcc
actggtaattttgaaattaaaaggttcagaatggaaagaaaaggaatgacacaggtgtta
caaaggttgtcatttattggtgctatgggccacatgacaagagtctcaccacagtttgag
aagtccaggaaagtaagtggacctagagctttgcagcctagtcagtggggcatgctttgt
ccttgtgacacccctgaaggtgaagcttgtggactggtcaagaatttggctttgatgact
catgttactaccgatgaagaggaggcccccttaatttctatgtgttattcgttgggtgtt
gaagacctggaacttctctctgcagaggagcttcacacacctgactcctttcttgtaatt
ttaaatggtttaatccttggaaagcataggaagccactgcgttttgctaatgcaattaga
aaactgcggagagttggtaaaattggcgagtttgtaagtgtctttgtccataacaagcag
cactgtgtctacttagcttctgatggtggtagagtttgccgtcccctagtcattgctgac
aagggagtatcaagaatcaaagagcatcatatgaaagagttaatggatggagtacgcaca
tttgatgatttcttacgagatggcttgcttgagtatcttgatgttaatgaagaaaacaac
actttgattgctttatatgaaggagatgccactccagaaactacacatattgagattgag
ccttttaccattttgggagttattgcagggttaattccttatcctcatcataatcagtca
cctaggaacacatatcagtgtgcaatgggtaagcaagcgatgggaaatatagcatttaat
cagcttcgccggaatgacagcctgctttacctactcgtttatcctcaaagacctttactg
acaacaaagaccattgagctggttggatatgataaacttggagctggtcaaaatgccacg
gtagctgtaatgagctatagtggttatgatatcgaagatgccattgtcatgaacaaggca
tctcttgatcgtgggtttggtcgttgtatagttatgaaaaagtatagtgctgtcattcag
aagcattcgaatgacacatcagatcgaatacttaggcctaatagagctgcagacactgca
ggacgaatgcgggtacttgatgatgatggtattgctgctcctggggaaattcttaagcct
tttgacatctatatcaataaacaatcaccaattgatacacgtactcccaaagcatcagca
gcaaatttgcctgatagtgcatatcggtctaatgcacaatcattcaagggtcatggagga
gaggtagttgatagggtggttctatgctctgataaggataaaaacatgtgtatcaaattt
ctgattcgtcacactcgtagacctgagcttggtgataaatttagcagcagacatgggcaa
aaaggtgtttgtggaactattgttccgcaagaagactttccattttctgagaaaggcatt
tgtcctgatctgattatgaatcctcatggtttcccaagtcgaatgacggttggaaagatg
atagagcttcttggagggaaagcaggggtttcatgtggtcgatttcattatggcagtgct
tttggggaaagaagtggacatgcagacaaggttgaagccataagtgaaactcttgtgagt
aaaggcttcagctacagtgggaaagatttcatttattcaggtattactggttgtccactg
caagcctatattttcatgggtcctatttactaccaaaaattaaaacatatggtgcttgat
aagatgcatgctcgtggcagcggccctcgtgtcatgctaactaggcagcctacagaaggg
agagctagaaatggaggtcttcgtgttggagaaatggaacgcgattgcttgattgcttat
ggtgctagtatgttgatttatgaacgacttatgttgtctagtgatccttttgaagtgcag
gtatgtacagcatgtgggttgttaggatattacaaccataagctgaaaactggtatttgt
tcatattgtaagaatggagacaagatttccaccatgaagcttccatatgcatgcaaactt
atgattcaggaactccaatcaatgaatattgttccccgtttaaagctggcagatgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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