KEGG   Vitis vinifera (wine grape): 100241010
Entry
100241010         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100241010 isoform X2
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100241010
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100241010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100241010
   03009 Ribosome biogenesis [BR:vvi03009]
    100241010
Spliceosome [BR:vvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100241010
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    100241010
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1
Other DBs
NCBI-GeneID: 100241010
NCBI-ProteinID: XP_002281586
UniProt: A0A438JXS8 F6HNR9
Position
13:join(3995955..3995957,3996178..3996298,3996393..3996496,3998481..3998612,3998749..3998775)
AA seq 128 aa
MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFIVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK
DAIEKLLI
NT seq 387 nt   +upstreamnt  +downstreamnt
atgactgccgaagccgtgaatccgaaagcataccctctcgccgatgctcagctgactatt
acaattctcgatctcatccagcaagcagccaactacaaacagctcaaaaagggtgccaat
gaagctacgaagactcttaacagaggtatctcggagttcattgtaatggctgccgacact
gaacccctcgaaattctgctgcatcttcctttgcttgcggaggataaaaatgtgccctat
gtatttgtaccttcaaaacaagcacttggacgagcatgtggagtcacaaggccagtgatt
gcttgttctgtgacgagcaacgaaggaagccagttgaaatctcaaatacagcaacttaag
gatgccattgagaaactcttgatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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