KEGG   Vitis vinifera (wine grape): 100243213
Entry
100243213         CDS       T01084                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100243213
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     100243213
    REST complex
     100243213
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100243213
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress
Other DBs
NCBI-GeneID: 100243213
NCBI-ProteinID: XP_010652829
UniProt: F6HPJ0
Position
1:complement(join(10285127..10285297,10285465..10285576,10285651..10285811,10285928..10286080,10286203..10286341,10286429..10286529,10286639..10287283,10288519..10288610,10288764..10289459,10291303..10291557,10291656..10291783,10292113..10292267,10292902..10293182,10293382..10293411,10293492..10293567,10295248..10295384,10296606..10296948,10297025..10297189,10297320..10297418,10297498..10297684,10297774..10297926,10298500..10298576))
AA seq 1451 aa
MKRSRDDVYMGSQLKRPAVSSRGGEGSGQPQMMGGGTQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQP
PVKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALFHDH
PDLLVEFTHFLPDTSAASTQYAPSGRNPMHRERGSLVPPLRQILTDKKERITASHADRDL
SVDRPDTDHDRIIMRADNQRRGGEKEKERRDDRDRRERDDRDFDHDGNRDFNGMPRVPHK
RKVTRRVEDSVADQINQGGEGAENYGMRPMSSSYDDKNALKSMYNQEFVFCEKVKEKLRQ
SDSYQEFLKCLHIYSKEIITRTELQSLVGDLIGKYPDLMDEFNEFLTRCEKIDGFLAGVM
SKKSLWNEGHLPRSVKIEDRDRDRDRERDDRDKDRDRENRERDRLDKSGGFGNKDAVNQK
MSLFQNKEKYMAKPIQELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVLNDYWVSV
TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKTD
SPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEEWARCRSD
FNKVWAEIYAKNYHKSLDHRSFYFKQQDSKSSSTKALLAEIKEISEKKRKEDDVLLAIAA
GNRRPIIPNLEFEYPDSDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSR
PQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGASATNTKQINSSRNGDETIPPEQSS
SCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQQGKMQTSAAMADEMSGVSKQATCN
ERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRASNTALESGLELRPSNEVLPSSEVG
DCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREEGELSPNGDFEEDNFAVYGDAGVEG
KSKDTAASRQYQTRHGVEEICCGEAGGENDADADDEGEESAQRSSEDSENASENGDVSGS
ESGEGEECSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVEGDGTLLPFSERFLLTVKP
LAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYERMQSAKLNSSSGERKWRASSDTN
STDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQTVATD
EMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRIECSSAPTHLTIQLMDNGH
DKPEVTAVSMDPNFAAYLNSDFLSVVNEKKKSGIFLRRNKRKYARGDEFSVACQAMEGLQ
VVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSSCHDQAKSSNGCSVNGFTDC
FLPPNLPCCDS
NT seq 4356 nt   +upstreamnt  +downstreamnt
atgaaacggtcaagagatgatgtttacatgggctcgcaactcaaacgccctgccgtctcg
tcgcgcggcggcgaagggtctggccagccccaaatgatgggaggaggtacccagaaacta
acaacaaacgatgccttagcttatctcaaggcggtgaaggacatatttcaagacaaaagg
gataagtatgatgattttcttgaagtcatgaaagatttcaaggctcaaagaattgacact
gcaggtgtcatagcaagggtgaaagagttatttaaggggcatagggatctaattttgggt
ttcaataccttcttgccaaagggatatgagatcaccctcccacttgaggatgaacagcct
ccagttaagaagcctgttgaatttgaagaagccatcaattttgtgaacaagattaagaca
cggtttcaaggagatgatcatgtttataagtcatttttagacattttgaacatgtatcgg
aaggaaaacaagtccatcactgaggtctaccaagaggttgctgcacttttccatgatcac
ccagacctgcttgtggagttcactcattttctgcccgatacttcagctgcctctactcaa
tatgcgccatctggtaggaatcctatgcaccgagagaggggctctctcgtacctccattg
cgacagattcttactgacaagaaggaaaggattactgcttcacatgctgaccgtgacctc
agtgtcgaccgtcctgacacagaccatgatagaataatcatgagagcagacaatcaacgg
aggggtggtgaaaaagaaaaggagaggagagatgacagagaccggagagagcgagatgat
agagactttgaccatgatggcaatagggactttaatggcatgccacgtgttccccacaaa
aggaaagttacccgcagagttgaagactctgttgctgaccaaataaaccaaggtggagaa
ggtgctgaaaactatggaatgcggccaatgtcatcttcttatgatgataaaaatgccttg
aaaagtatgtacaaccaggagtttgttttctgtgagaaagtgaaggagaaattacgacag
tctgatagctaccaggaatttttgaaatgccttcatatttatagcaaggaaataattact
cgaacagaattgcaatctctggttggagatttaattggaaagtatcctgatcttatggac
gagttcaatgaatttttgacccgttgtgagaagattgatggatttcttgctggtgttatg
agtaaaaaatccttgtggaatgaaggacatttacccagatcagtgaagatagaggatagg
gatagagatcgagatcgtgaaagggatgatagggacaaagatagagaccgggaaaataga
gagagggatagacttgataaaagtggaggctttggcaataaagatgcagttaatcaaaag
atgtctttgttccaaaacaaggagaagtatatggcaaagcccattcaagaacttgatctc
tctaactgtgagcgctgtactcccagttatcgacttcttccaaagaattatccgatacct
tctgcaagccagagaacagaacttggtgcagaagtgttgaatgactattgggtgtctgtc
acttcgggaagtgaggattattcttttaagcacatgcgcaaaaaccaatatgaagagagt
ctattccgatgtgaagatgacaggtttgaactggacatgctgttagagtctgtaaatgta
acaactaagcgtgtggaagaattgttagataagatcaacaataatactatcaaaacagat
agtccaattcgtattgaggactacttcacagctctgaatcttagatgcattgaacgttta
tatggtgaccatgggcttgatgtgatggacgtattgaggaagaatgcaactcttgctttg
ccagttatactaactcgcttgaaacagaaacaagaggagtgggctaggtgtcgttctgat
tttaataaagtttgggcagaaatttatgccaagaactatcacaaatctcttgatcatcgc
agcttctatttcaagcaacaggactcaaagagctcgagcacaaaggctttattggctgag
attaaagaaattagtgagaagaagcggaaagaggatgatgtgcttcttgctattgctgct
ggaaatagacgacctatcattccaaacttggaatttgagtaccctgattcagacattcat
gaagatttgtaccagcttatcaaatattcctgtggagaagtttgtacaactgaacagttg
gataaggttatgaaaatttggacaaccttcctggaacctatgcttggggttccttctcgg
ccccagggtgcagaggactctgaagatgttgtgaagactaagagtcatgctgccaagaat
ggtgctgcaagcattggagaaagtgacgggagtcctggtggtggtgcaagtgcgacaaac
accaaacagattaattcatctagaaatggagatgaaactattccacctgagcaatcaagt
tcttgcagggtttggatggtaaatggagataatggggttaaagaagatggttctcttgat
gcagaccgtatgccacgtaaggctgatactttttgtgctagtactcaacaagggaaaatg
cagaccagtgctgctatggctgatgaaatgtctggggtcagcaaacaagctacttgtaat
gaacgggtgaccaattcaaatgcctcccttgctagtggagcagagcagagtcatggaaga
accaacatggaaaatacgtcaggacttaatgctactccttccagagctagtaatactgct
cttgagagtgggctcgaattgagaccaagtaatgaagttttaccttcatcagaggttggt
gattgtatcagaccaactatatctacaaatggtgtgatgacagaaggtgtcaaagctcac
agatatcatgaagaatctgctgggaactcaaaaattgaaagagaagagggtgagttatct
ccaaatggagattttgaggaggataattttgcagtctatggggatgccggtgttgaaggt
aaatcaaaggatactgctgcaagcaggcaatatcaaaccagacatggagtggaagaaata
tgttgtggagaagctgggggagaaaatgatgctgatgctgatgatgaaggtgaggaaagt
gctcagaggtcatcagaagacagtgagaacgcttctgagaatggtgatgtttcaggaagt
gaatcaggtgagggtgaggaatgctctcgtgaagagcatgaggaagatggggatcatgat
gagcatgataacaaggctgagagtgaaggtgaggctgaaggaatggctgatgcacatgat
gttgaaggagatggaacattgttaccattttcagaacgttttctactaactgtgaagcct
cttgcaaagcatgttcctccatctttacaggacaaagagaaaaactctcgggttttttat
ggaaatgattctttttatgtgctttttaggcttcatcaaacactgtatgagagaatgcag
tcagcaaagctcaattcatcttcaggtgaaaggaaatggagagcttcaagtgacacaaat
tctactgatttgtatgccagattcatgaatgcactttacaatttacttgatggttcttct
gacaatacaaaatttgaggatgattgccgagcaatcataggaactcagtcatatgttcta
tttacattagataagctgatatataaacttgtcaagcagctgcaaacagttgcaacagat
gagatggacaacaagctcctccaactttatgcatatgaaaaatcaagaaagcctgggaga
tttgtcgatatggtttattatgaaaactcccgtgttcttcttcatgacgagaacatttat
cgcattgagtgttcgtctgctcccactcatttgaccattcagcttatggacaatgggcat
gataagcctgaagtgactgctgtttccatggaccctaattttgcagcttatcttaacagt
gatttcctttcagttgttaatgaaaaaaagaaatctggaatttttttgaggagaaacaag
cgcaaatatgcacgaggagacgagttttctgttgcgtgccaggccatggaaggacttcaa
gttgtcaatggtcttgaatgtaagatagcatgcagttcatccaaggtatcatatgtttta
gacacagaagatttcttgttccgagtgaggaagaaacggaaaacttcagtgaggaagagt
tcatgccatgaccaggcaaagtcttcaaatggctgttcagttaatggattcacagattgc
tttcttcctcctaatctgccctgctgtgactcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (55)   

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